RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CYP2U1Q7Z449 544 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 MYCT1Q8N699 235 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 KIAA1958Q8N8K9 716 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 USP33Q8TEY7 942 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 CDK5RAP3Q96JB5 506 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 ZSCAN31Q96LW9 406 aaPredicted RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 ACBD6Q9BR61 282 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 PARVGQ9HBI0 331 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 TMLHEQ9NVH6 421 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 MAGED2Q9UNF1 606 aaPredicted RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 NEUROG3Q9Y4Z2 214 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 STYXL1Q9Y6J8 313 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 ATG2BQ96BY7 2078 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 WDFY3Q8IZQ1 3526 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 TRAV19A0A0A6YYK7 116 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 K7ENM7 598 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 TRAK2O60296 914 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 TADA3O75528 432 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 SPINK2P20155 84 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 PNPLA4P41247 253 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 IRX4P78413 519 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 PSMD2Q13200 908 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 RILPL1Q5EBL4 403 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 REEP2Q9BRK0 252 aa19.96■□□□□ 0.79
TPM1-226ENST00000560959 TSC2P49815 1807 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 DPP6P42658 865 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 ACOT2P49753 483 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 CDR1P51861 262 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 SPDYCQ5MJ68 293 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 ARL6IP4Q66PJ3 421 aaKnown RBP19.95■□□□□ 0.78
TPM1-226ENST00000560959 LRSAM1Q6UWE0 723 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 FSIP1Q8NA03 581 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 OLIG1Q8TAK6 271 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 ZNF560Q96MR9 790 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 PLIN2Q99541 437 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 PI4K2AQ9BTU6 479 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 SLC32A1Q9H598 525 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 MMP17Q9ULZ9 603 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 DENND4CQ5VZ89 1909 aa19.95■□□□□ 0.78
TPM1-226ENST00000560959 MYH11P35749 1972 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 UPK3BL1B0FP48 263 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 UPK3BL2E5RIL1 263 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 K7EQS6 105 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 TNFRSF10BO14763 440 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 FAM13AO94988 1023 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 NFATC1O95644 943 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
TPM1-226ENST00000560959 HOXB3P14651 431 aaPredicted RBP19.94■□□□□ 0.78
TPM1-226ENST00000560959 PFKLP17858 780 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 GPR15P49685 360 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 PDE6CP51160 858 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 MRPS21P82921 87 aaKnown RBP19.94■□□□□ 0.78
TPM1-226ENST00000560959 CRY1Q16526 586 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 ADALQ6DHV7 355 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 TMEM86AQ8N2M4 240 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 SPATA18Q8TC71 538 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 AK8Q96MA6 479 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 FIZ1Q96SL8 496 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 CYP2S1Q96SQ9 504 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 ST6GALNAC4Q9H4F1 302 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 GCNT4Q9P109 453 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 AGO2Q9UKV8 859 aaKnown RBP19.94■□□□□ 0.78
TPM1-226ENST00000560959 INVSQ9Y283 1065 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 WNT6Q9Y6F9 365 aa19.94■□□□□ 0.78
TPM1-226ENST00000560959 PATE3B3GLJ2 98 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 ALDH1A2O94788 518 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 IL18RAPO95256 599 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 CKMP06732 381 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 BCKDHBP21953 392 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 DDR2Q16832 855 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 CFAP221Q4G0U5 840 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 HSF5Q4G112 596 aaPredicted RBP19.93■□□□□ 0.78
TPM1-226ENST00000560959 GPBP1Q86WP2 473 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 EFCAB13Q8IY85 973 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 FUBP3Q96I24 572 aaKnown RBP eCLIP19.93■□□□□ 0.78
TPM1-226ENST00000560959 CEP295NLQ96MC4 621 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 SLC22A12Q96S37 553 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 NUSAP1Q9BXS6 441 aaKnown RBP19.93■□□□□ 0.78
TPM1-226ENST00000560959 TPSD1Q9BZJ3 242 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 LINC00597Q9H2U6 94 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 TRPC7Q9HCX4 862 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 ARHGAP26Q9UNA1 814 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 MSRB2Q9Y3D2 182 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 IGF2RP11717 2491 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 ABCA7Q8IZY2 2146 aa19.93■□□□□ 0.78
TPM1-226ENST00000560959 SCN1AP35498 2009 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 ZFYVE26Q68DK2 2539 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 VWA3AA6NCI4 1184 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 ANKRD63C9JTQ0 380 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 CYP2F1P24903 491 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 OPRD1P41143 372 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 DHPSP49366 369 aaPredicted RBP19.92■□□□□ 0.78
TPM1-226ENST00000560959 POSTNQ15063 836 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 INTS6LQ5JSJ4 861 aaKnown RBP19.92■□□□□ 0.78
TPM1-226ENST00000560959 SDHAF4Q5VUM1 108 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 ANO7Q6IWH7 933 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 LPCAT2Q7L5N7 544 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 SYT12Q8IV01 421 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 PDCL2Q8N4E4 241 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 DEFB124Q8NES8 71 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms