RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FRMD1Q8N878 549 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SNX29Q8TEQ0 813 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 RLN3Q8WXF3 142 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ATP2A3Q93084 1043 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 SLC32A1Q9H598 525 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 C17orf75Q9HAS0 396 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 TMLHEQ9NVH6 421 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ABI2Q9NYB9 513 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 MBD1Q9UIS9 605 aaPredicted RBP10.72□□□□□ -0.69
TPM1-225ENST00000560679 MMP17Q9ULZ9 603 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 TCHHQ07283 1943 aa10.72□□□□□ -0.69
TPM1-225ENST00000560679 ANO9A1A5B4 782 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 PIRO00625 290 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 KALRNO60229 2985 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 GUCY2CP25092 1073 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 OPRD1P41143 372 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 RAD51AP2Q09MP3 1159 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 MESP2Q0VG99 397 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 STRN3Q13033 797 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 COL28A1Q2UY09 1125 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 GON4LQ3T8J9 2241 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 C2orf27AQ580R0 203 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 TTC38Q5R3I4 469 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 JADE1Q6IE81 842 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 CC2D1AQ6P1N0 951 aaPredicted RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 C2orf15Q8WU43 125 aaKnown RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 MRPS31Q92665 395 aaKnown RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 MMTAG2Q9BU76 263 aaKnown RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 DUS2Q9NX74 493 aaKnown RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 LRWD1Q9UFC0 647 aa10.71□□□□□ -0.69
TPM1-225ENST00000560679 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.71□□□□□ -0.69
TPM1-225ENST00000560679 PLXNB3Q9ULL4 1909 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 NOL4O94818 638 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 PLS3P13797 630 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 IFNAR2P48551 515 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 SCAPQ12770 1279 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 TAF12Q16514 161 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 CRY1Q16526 586 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
TPM1-225ENST00000560679 WSCD1Q658N2 575 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 SLC39A4Q6P5W5 647 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 SLC23A3Q6PIS1 610 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 LPCAT2Q7L5N7 544 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 SYT12Q8IV01 421 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 EFCAB13Q8IY85 973 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 TMEFF1Q8IYR6 380 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 CCDC33Q8N5R6 958 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 OR2I1PQ8NGU4 316 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 EXOC4Q96A65 974 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 CYP2S1Q96SQ9 504 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 NUSAP1Q9BXS6 441 aaKnown RBP10.7□□□□□ -0.7
TPM1-225ENST00000560679 LINC00597Q9H2U6 94 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 PILRBQ9UKJ0 227 aa10.7□□□□□ -0.7
TPM1-225ENST00000560679 MAGED2Q9UNF1 606 aaPredicted RBP10.7□□□□□ -0.7
TPM1-225ENST00000560679 ACACAQ13085 2346 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 MAST4O15021 2626 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 H0Y626 953 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CYB561D2O14569 222 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 OGTO15294 1046 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 XPOTO43592 962 aaKnown RBP10.69□□□□□ -0.7
TPM1-225ENST00000560679 TRIM16O95361 564 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 ITPKAP23677 461 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CDC25AP30304 524 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPM1-225ENST00000560679 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 ZXDBP98169 803 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 TRIM29Q14134 588 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 SAFBQ15424 915 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPM1-225ENST00000560679 IL17AQ16552 155 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CCDC142Q17RM4 750 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 MAP7D1Q3KQU3 841 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 TTC30AQ86WT1 665 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 SH3RF2Q8TEC5 729 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 KCNN1Q92952 543 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 TRMT2BQ96GJ1 504 aaKnown RBP10.69□□□□□ -0.7
TPM1-225ENST00000560679 PYM1Q9BRP8 204 aaKnown RBP10.69□□□□□ -0.7
TPM1-225ENST00000560679 TIPINQ9BVW5 301 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 RPF1Q9H9Y2 349 aaKnown RBP10.69□□□□□ -0.7
TPM1-225ENST00000560679 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 GCNT4Q9P109 453 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
TPM1-225ENST00000560679 DSEQ9UL01 958 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
TPM1-225ENST00000560679 CEP192Q8TEP8 1941 aa10.68□□□□□ -0.7
TPM1-225ENST00000560679 A0A0B4J269 797 aa10.68□□□□□ -0.7
TPM1-225ENST00000560679 NPHP3-ACAD11A0A0J9YXS1 232 aa10.68□□□□□ -0.7
TPM1-225ENST00000560679 C2orf78A6NCI8 922 aa10.68□□□□□ -0.7
TPM1-225ENST00000560679 SGK1O00141 431 aa10.68□□□□□ -0.7
TPM1-225ENST00000560679 ADAM23O75077 832 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms