RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	BRD9	Q9H8M2	597 aa		4.62	□□□□□ -1.67
SLTM-223	ENST00000560532	DUSP22	Q9NRW4	184 aa		4.62	□□□□□ -1.67
SLTM-223	ENST00000560532	MKS1	Q9NXB0	559 aa		4.62	□□□□□ -1.67
SLTM-223	ENST00000560532	CALCOCO1	Q9P1Z2	691 aa		4.62	□□□□□ -1.67
SLTM-223	ENST00000560532	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.62	□□□□□ -1.67
SLTM-223	ENST00000560532	CCDC154	A6NI56	674 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	ZNF785	A8K8V0	405 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532		H3BNX3	289 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	FCHO1	O14526	889 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	CDK11B	P21127	795 aa	Known RBP	4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	EDNRB	P24530	442 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	KCNJ5	P48544	419 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	HTRA4	P83105	476 aa	Predicted RBP	4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	KHDC1	Q4VXA5	237 aa	Known RBP	4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	FCRL6	Q6DN72	434 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	C9orf47	Q6ZRZ4	202 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	FAM109A	Q8N4B1	249 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	SCAMP4	Q969E2	229 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	SCAF8	Q9UPN6	1271 aa	Known RBP	4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	SQOR	Q9Y6N5	450 aa		4.61	□□□□□ -1.67
SLTM-223	ENST00000560532	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	ABLIM3	O94929	683 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	GJB1	P08034	283 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	MAL	P21145	153 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	MTMR1	Q13613	665 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	HABP2	Q14520	560 aa	Predicted RBP	4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	TWIST1	Q15672	202 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	CERKL	Q49MI3	558 aa	Predicted RBP	4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	TREML2	Q5T2D2	321 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	PDSS2	Q86YH6	399 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	LRRC71	Q8N4P6	559 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	PRPF38A	Q8NAV1	312 aa	Known RBP	4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	DAZAP1	Q96EP5	407 aa	Known RBP	4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	ADAMTS5	Q9UNA0	930 aa		4.6	□□□□□ -1.67
SLTM-223	ENST00000560532	SMAD6	O43541	496 aa	Known RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	GNAI3	P08754	354 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	IL6R	P08887	468 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	CYP2A6	P11509	494 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	IARS	P41252	1262 aa	Known RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	PHKA1	P46020	1223 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	ZNF135	P52742	658 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	PDE1A	P54750	535 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	GNAI1	P63096	354 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	KIF23	Q02241	960 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	SNAPC2	Q13487	334 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	ZNF268	Q14587	947 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	LEXM	Q3ZCV2	418 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	PPP4R3A	Q6IN85	833 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	CUL5	Q93034	780 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	THOC3	Q96J01	351 aa	Known RBP	4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	TRMO	Q9BU70	441 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	CNPPD1	Q9BV87	410 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	FSD1L	Q9BXM9	530 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	KRTAP4-4	Q9BYR3	166 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	PCDH12	Q9NPG4	1184 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	SLAMF7	Q9NQ25	335 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	MAN1C1	Q9NR34	630 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	TXLNG	Q9NUQ3	528 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	AGAP1	Q9UPQ3	857 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	COL4A3BP	Q9Y5P4	624 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	RAD54B	Q9Y620	910 aa		4.59	□□□□□ -1.67
SLTM-223	ENST00000560532	PRSS29P	A6NIE9	313 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	FZD9	O00144	591 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	KRT86	O43790	486 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	SOAT2	O75908	522 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	USP1	O94782	785 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	KIF20A	O95235	890 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	MT-CO1	P00395	513 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	NPS	P0C0P6	89 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	HOXD9	P28356	352 aa	Predicted RBP	4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	SMARCA1	P28370	1054 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	CYP2C19	P33261	490 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	GUCY2F	P51841	1108 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	RHD	Q02161	417 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	FHL3	Q13643	280 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	KRT81	Q14533	505 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	SYDE2	Q5VT97	1194 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	KRTAP5-4	Q6L8H1	288 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	SLC4A10	Q6U841	1118 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	BRINP2	Q9C0B6	783 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	TRHDE	Q9UKU6	1024 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	ICK	Q9UPZ9	632 aa		4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.58	□□□□□ -1.68
SLTM-223	ENST00000560532	KLHL33	A6NCF5	533 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	ALG1L2	C9J202	215 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	POC1B-GALNT4	F8VUJ3	575 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	GABRD	O14764	452 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	DSCR3	O14972	297 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	SLC16A3	O15427	465 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	XPOT	O43592	962 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA12	O60330	932 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PDE8B	O95263	885 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	CHEK2	O96017	543 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	CRYAB	P02511	175 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	RPLP2	P05387	115 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	FES	P07332	822 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	CYP19A1	P11511	503 aa	Predicted RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	MT3	P25713	68 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	TOB1	P50616	345 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms