RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FHL5Q5TD97 284 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 CATSPER4Q7RTX7 472 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 TRMT1LQ7Z2T5 733 aaKnown RBP7.15□□□□□ -1.26
HERC1-208ENST00000560462 ZNF654Q8IZM8 581 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 LSMEM2Q8N112 164 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 ZNF461Q8TAF7 563 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 ZNF564Q8TBZ8 553 aaPredicted RBP7.15□□□□□ -1.26
HERC1-208ENST00000560462 CD101Q93033 1021 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 IFT43Q96FT9 208 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 ZFP42Q96MM3 310 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 FAM83CQ9BQN1 747 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 POLR3CQ9BUI4 534 aaPredicted RBP7.15□□□□□ -1.26
HERC1-208ENST00000560462 INO80BQ9C086 356 aaPredicted RBP7.15□□□□□ -1.26
HERC1-208ENST00000560462 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 CYP4F11Q9HBI6 524 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 ZNF302Q9NR11 478 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 USP3Q9Y6I4 520 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 AKAP9Q99996 3911 aa7.15□□□□□ -1.26
HERC1-208ENST00000560462 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.27
HERC1-208ENST00000560462 PRAMEF12O95522 483 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 MYH6P13533 1939 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 USP11P51784 963 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 CDC42EP1Q00587 391 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 ELAVL2Q12926 359 aaKnown RBP7.14□□□□□ -1.27
HERC1-208ENST00000560462 INAVAQ3KP66 663 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 WDR45BQ5MNZ6 344 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 HIVEP3Q5T1R4 2406 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 TRIM68Q6AZZ1 485 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 CCDC60Q8IWA6 550 aaPredicted RBP7.14□□□□□ -1.27
HERC1-208ENST00000560462 TCEAL8Q8IYN2 117 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
HERC1-208ENST00000560462 CNNM3Q8NE01 707 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 SMARCC2Q8TAQ2 1214 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 ZDHHC1Q8WTX9 485 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 LNPKQ9C0E8 428 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 AGPAT5Q9NUQ2 364 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 MIOSQ9NXC5 875 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 CEP72Q9P209 647 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 TBX20Q9UMR3 447 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 ZNF232Q9UNY5 417 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 UBIAD1Q9Y5Z9 338 aa7.14□□□□□ -1.27
HERC1-208ENST00000560462 MED13LQ71F56 2210 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 PTPRDP23468 1912 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 PLXND1Q9Y4D7 1925 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 NFASCO94856 1347 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 A0A087WZ62 844 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 EIF1AYO14602 144 aaKnown RBP7.13□□□□□ -1.27
HERC1-208ENST00000560462 ENC1O14682 589 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 KIF4AO95239 1232 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 MPOP05164 745 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 FGRP09769 529 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 PARP1P09874 1014 aaKnown RBP7.13□□□□□ -1.27
HERC1-208ENST00000560462 ATF2P15336 505 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 ATP4AP20648 1035 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 MAOBP27338 520 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 GJA4P35212 333 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 HIF1AQ16665 826 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 SGO2Q562F6 1265 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 CACTIN-AS1Q8N1I8 211 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 SMG8Q8ND04 991 aaKnown RBP7.13□□□□□ -1.27
HERC1-208ENST00000560462 TTC16Q8NEE8 873 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 MTMR8Q96EF0 704 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 ZNF419Q96HQ0 510 aaPredicted RBP7.13□□□□□ -1.27
HERC1-208ENST00000560462 FDXACB1Q9BRP7 624 aaPredicted RBP7.13□□□□□ -1.27
HERC1-208ENST00000560462 THSD1Q9NS62 852 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 ANAPC4Q9UJX5 808 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 CLCA2Q9UQC9 943 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 BACE2Q9Y5Z0 518 aa7.13□□□□□ -1.27
HERC1-208ENST00000560462 MED13Q9UHV7 2174 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 IGHV1OR15-9A0A0B4J2B8 117 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 TCRBV21S2A2A0A5A6 115 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 IPO5O00410 1097 aaKnown RBP7.12□□□□□ -1.27
HERC1-208ENST00000560462 RNF113AO15541 343 aaKnown RBP7.12□□□□□ -1.27
HERC1-208ENST00000560462 CPNE3O75131 537 aaKnown RBP7.12□□□□□ -1.27
HERC1-208ENST00000560462 ABLIM3O94929 683 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 SEC24AO95486 1093 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 PRKCBP05771 671 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 RNF224P0DH78 156 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 ARSAP15289 507 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 GABREP78334 506 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 BNC1Q01954 994 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 ROR1Q01973 937 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 ARID5AQ03989 594 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 TWF1Q12792 350 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 SART3Q15020 963 aaKnown RBP7.12□□□□□ -1.27
HERC1-208ENST00000560462 ZSCAN23Q3MJ62 389 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 DCAF6Q58WW2 860 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 UBXN11Q5T124 520 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 SWSAP1Q6NVH7 229 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 ABHD15Q6UXT9 468 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 USP53Q70EK8 1073 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 HS2ST1Q7LGA3 356 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 HOMER1Q86YM7 354 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 ZCCHC9Q8N567 271 aaKnown RBP7.12□□□□□ -1.27
HERC1-208ENST00000560462 DCBLD1Q8N8Z6 715 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 CUL5Q93034 780 aa7.12□□□□□ -1.27
HERC1-208ENST00000560462 VCPIP1Q96JH7 1222 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms