RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PCED1BQ96HM7 432 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 HSD3B7Q9H2F3 369 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 POMKQ9H5K3 350 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 SAMSN1Q9NSI8 373 aaKnown RBP14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 GCNT4Q9P109 453 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 DAAM1Q9Y4D1 1078 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 SPTBN5Q9NRC6 3674 aaKnown RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 MYBPHLA2RUH7 354 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 ESPNB1AK53 854 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CSH1P0DML2 217 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CSH2P0DML3 217 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 RFX1P22670 979 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CDC25BP30305 580 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 NDST1P52848 882 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CDH8P55286 799 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 ZP2Q05996 745 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 PABPC1LQ4VXU2 614 aaKnown RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 TDRD5Q8NAT2 981 aaKnown RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 ADAMTS19Q8TE59 1207 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 SPATA17Q96L03 361 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 APOL5Q9BWW9 433 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CRTAC1Q9NQ79 661 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 ASAH2Q9NR71 780 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 KIAA1257Q9ULG3 409 aa14.88□□□□□ -0.03
PKNOX1-209ENST00000560448 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 LRRC10BA6NIK2 292 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 SOBPA7XYQ1 873 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 LOC730098B7Z3J9 87 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 DLL1O00548 723 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 CCL16O15467 120 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 WEE2P0C1S8 567 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 PSMC1P62191 440 aaKnown RBP14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 TPM4P67936 248 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 TRIM65Q6PJ69 517 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 NXPE3Q969Y0 559 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 MYLPFQ96A32 169 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 TRIM5Q9C035 493 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 GPR88Q9GZN0 384 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 SDCBP2Q9H190 292 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 CRISPLD1Q9H336 500 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 TMLHEQ9NVH6 421 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 FANCLQ9NW38 375 aa14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 UXTQ9UBK9 157 aaPredicted RBP14.87□□□□□ -0.03
PKNOX1-209ENST00000560448 RHOP08100 348 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 PAEPP09466 180 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 ZNF18P17022 549 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 FSHRP23945 695 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 ANXA13P27216 316 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 RAP1GAPP47736 663 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 MFAP3P55082 362 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 CYP27A1Q02318 531 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 MDH1BQ5I0G3 518 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 MIIPQ5JXC2 388 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 FKBP15Q5T1M5 1219 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 PPM1KQ8N3J5 372 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 TRMT2BQ96GJ1 504 aaKnown RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 SMARCD1Q96GM5 515 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 C8orf48Q96LL4 319 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 UHRF1Q96T88 793 aaPredicted RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 HNRNPABQ99729 332 aaKnown RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 INTS2Q9H0H0 1204 aaKnown RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 PNPLA8Q9NP80 782 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 GDE1Q9NZC3 331 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 CEP72Q9P209 647 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 DNMT3BQ9UBC3 853 aaKnown RBP14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 NME7Q9Y5B8 376 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 PTPRDP23468 1912 aa14.86□□□□□ -0.03
PKNOX1-209ENST00000560448 UNC80Q8N2C7 3258 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 ATF6P18850 670 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 CD58P19256 250 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 CDC25CP30307 473 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 PPP3CCP48454 512 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 STILQ15468 1287 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 TAF12Q16514 161 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 DNAJB7Q7Z6W7 309 aaPredicted RBP14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 ACOT1Q86TX2 421 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 GJD3Q8N144 294 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 TATDN2Q93075 761 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 MYRFLQ96LU7 910 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 GCNAQ96QF7 691 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 DPEP3Q9H4B8 488 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 COMMD8Q9NX08 183 aa14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 EPS15L1Q9UBC2 864 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms