RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ARMCX6Q7L4S7 300 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 CCDC33Q8N5R6 958 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 RLN3Q8WXF3 142 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 CNOT6LQ96LI5 555 aaKnown RBP17.92■□□□□ 0.46
HERC1-207ENST00000560316 PLIN2Q99541 437 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 SLC32A1Q9H598 525 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 EVLQ9UI08 416 aaPredicted RBP17.92■□□□□ 0.46
HERC1-207ENST00000560316 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
HERC1-207ENST00000560316 PCDHB6Q9Y5E3 794 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 PCDHB5Q9Y5E4 795 aa17.92■□□□□ 0.46
HERC1-207ENST00000560316 K7EQS6 105 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 PRPF40AO75400 957 aaKnown RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 CSH1P0DML2 217 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 CSH2P0DML3 217 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 TOB1P50616 345 aaPredicted RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 NCKAP1LP55160 1127 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 SIM1P81133 766 aaPredicted RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 LMAN2Q12907 356 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 USP4Q13107 963 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 CD302Q8IX05 232 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 LINC00597Q9H2U6 94 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 TMEM74BQ9NUR3 256 aa17.91■□□□□ 0.46
HERC1-207ENST00000560316 CPSF3Q9UKF6 684 aaKnown RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
HERC1-207ENST00000560316 PCNX2A6NKB5 2137 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 A0A0B4J269 797 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 HNRNPLP14866 589 aaKnown RBP eCLIP17.9■□□□□ 0.46
HERC1-207ENST00000560316 ENGP17813 658 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 TAF6P49848 677 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 SLC12A3P55017 1021 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 DDR2Q16832 855 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 ZC2HC1CQ53FD0 456 aaPredicted RBP17.9■□□□□ 0.46
HERC1-207ENST00000560316 EFCAB13Q8IY85 973 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 TMEFF1Q8IYR6 380 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 FRMD1Q8N878 549 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 PNMA5Q96PV4 448 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 NUSAP1Q9BXS6 441 aaKnown RBP17.9■□□□□ 0.46
HERC1-207ENST00000560316 FSCN3Q9NQT6 498 aa17.9■□□□□ 0.46
HERC1-207ENST00000560316 ITPR1Q14643 2758 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 TRAV19A0A0A6YYK7 116 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 H0YCG3 227 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 CKMP06732 381 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 USP17L7P0C7H9 530 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 OPRD1P41143 372 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 PTGER3P43115 390 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 ACOT2P49753 483 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 NEK4P51957 841 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 NR1H3Q13133 447 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 CRY1Q16526 586 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 SLC39A4Q6P5W5 647 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 TMEM92Q6UXU6 159 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 DTHD1Q6ZMT9 781 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 LPCAT2Q7L5N7 544 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 PIP4P1Q86T03 277 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 ARL14EPQ8N8R7 260 aaPredicted RBP17.89■□□□□ 0.45
HERC1-207ENST00000560316 CCDC26Q8TAB7 109 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 OLIG1Q8TAK6 271 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 SH3RF2Q8TEC5 729 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 FNBP1Q96RU3 617 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 DPP3Q9NY33 737 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 LARSQ9P2J5 1176 aaKnown RBP17.89■□□□□ 0.45
HERC1-207ENST00000560316 MMP17Q9ULZ9 603 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 DERAQ9Y315 318 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 ATXN2Q99700 1313 aaKnown RBP17.89■□□□□ 0.45
HERC1-207ENST00000560316 FREM2Q5SZK8 3169 aa17.89■□□□□ 0.45
HERC1-207ENST00000560316 GON4LQ3T8J9 2241 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 K7ENM7 598 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 MAP3K13O43283 966 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 PIGRP01833 764 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 PLA2G4BP0C869 781 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 CYP2F1P24903 491 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 ARSHQ5FYA8 562 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 SYT12Q8IV01 421 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 CCDC83Q8IWF9 413 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 SFTPA1Q8IWL2 248 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 CHCHD4Q8N4Q1 142 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 TMEM206Q9H813 350 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 UXTQ9UBK9 157 aaPredicted RBP17.88■□□□□ 0.45
HERC1-207ENST00000560316 MBD1Q9UIS9 605 aaPredicted RBP17.88■□□□□ 0.45
HERC1-207ENST00000560316 LAMA5O15230 3695 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 PTPRDP23468 1912 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 TCHHQ07283 1943 aa17.88■□□□□ 0.45
HERC1-207ENST00000560316 C2orf78A6NCI8 922 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 KPNA7A9QM74 516 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 TNFRSF10BO14763 440 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 NOL4O94818 638 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 P2RY2P41231 377 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 FAM193AP78312 1265 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 TSPY1Q01534 308 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 SEMA3BQ13214 749 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 GAB4Q2WGN9 574 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 HYIQ5T013 277 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 C19orf48Q6RUI8 117 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 LRRC15Q8TF66 581 aa17.87■□□□□ 0.45
HERC1-207ENST00000560316 CCSER1Q9C0I3 900 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms