RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TENM4Q6N022 2769 aa13.86□□□□□ -0.19
RABGGTA-213ENST00000560127 XPOTO43592 962 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 TADA3O75528 432 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 SEC24BO95487 1268 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 MAPTP10636 758 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 P2RY2P41231 377 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 FAM160A1Q05DH4 1040 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 ENOX2Q16206 610 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 CRY1Q16526 586 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 TMEM92Q6UXU6 159 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 LPCAT2Q7L5N7 544 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 CCDC33Q8N5R6 958 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 CCDC26Q8TAB7 109 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 SPPL2BQ8TCT7 592 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 SPIRE2Q8WWL2 714 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 FSCN3Q9NQT6 498 aa13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 ATXN2Q99700 1313 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-213ENST00000560127 PIRO00625 290 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 FAM189A1O60320 539 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 JAK2O60674 1132 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 ADRB2P07550 413 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 RDXP35241 583 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 OPRD1P41143 372 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 IFNAR2P48551 515 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 GPR15P49685 360 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 USP4Q13107 963 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 ZNF423Q2M1K9 1284 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 C9orf57Q5W0N0 161 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 TTC30AQ86WT1 665 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 C4orf32Q8N8J7 132 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 CYP2S1Q96SQ9 504 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 TMLHEQ9NVH6 421 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 LRWD1Q9UFC0 647 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 PILRBQ9UKJ0 227 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 MAGED2Q9UNF1 606 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
RABGGTA-213ENST00000560127 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 ITPKAP23677 461 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 PAX3P23760 479 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 TRIM29Q14134 588 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 ME3Q16798 604 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 SDHAF4Q5VUM1 108 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 KCNK18Q7Z418 384 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 EFCAB13Q8IY85 973 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 HDDC3Q8N4P3 179 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 TTC16Q8NEE8 873 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 SNX29Q8TEQ0 813 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 GTF3C6Q969F1 213 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 DSEQ9UL01 958 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 ZNF462Q96JM2 2506 aa13.83□□□□□ -0.2
RABGGTA-213ENST00000560127 PTPRQQ9UMZ3 2332 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 CYB561D2O14569 222 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 MAP3K13O43283 966 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 CFIP05156 583 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 NFICP08651 508 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 CSH1P0DML2 217 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 CSH2P0DML3 217 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 PLS3P13797 630 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 GUCY1B3Q02153 619 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 NR1H3Q13133 447 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 WSCD1Q658N2 575 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 METTL23Q86XA0 190 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 SFTPA1Q8IWL2 248 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 THEM5Q8N1Q8 247 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 SPACA7Q96KW9 195 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 GTPBP2Q9BX10 602 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 TRPC7Q9HCX4 862 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 PCDHB5Q9Y5E4 795 aa13.82□□□□□ -0.2
RABGGTA-213ENST00000560127 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 SGK1O00141 431 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 OPHN1O60890 802 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 NOL4O94818 638 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 CKMP06732 381 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms