RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CSPG5O95196 566 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 IL18RAPO95256 599 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 LDHAP00338 332 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 TNNC2P02585 160 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 GYPCP04921 128 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 ITGB1P05556 798 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SCP2P22307 547 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 PON1P27169 355 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SCN1AP35498 2009 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 MAGEA10P43363 369 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 TSC2P49815 1807 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 FXR1P51114 621 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-220ENST00000559933 ADKP55263 362 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 BCAR1P56945 870 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 WDR5P61964 334 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 FPGSQ05932 587 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 ORC1Q13415 861 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 RAPGEF1Q13905 1077 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 PCBP1Q15365 356 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-220ENST00000559933 CCDC142Q17RM4 750 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 RSPO4Q2I0M5 234 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 ZACNQ401N2 412 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 FILIP1LQ4L180 1135 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 NKAPLQ5M9Q1 402 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TMEM240Q5SV17 173 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 C9orf50Q5SZB4 431 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 FKBP15Q5T1M5 1219 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 KRT39Q6A163 491 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 FAM109BQ6ICB4 259 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 IQCEQ6IPM2 695 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TRIM65Q6PJ69 517 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SLC24A5Q71RS6 500 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 RRAGAQ7L523 313 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TRAPPC11Q7Z392 1133 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 ZNF438Q7Z4V0 828 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 MRPL10Q7Z7H8 261 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 TMEM173Q86WV6 379 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 WDR49Q8IV35 697 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 DRC7Q8IY82 874 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TMEM199Q8N511 208 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 C3orf58Q8NDZ4 430 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 BCL7CQ8WUZ0 217 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 TP53INP1Q96A56 240 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 ZNF830Q96NB3 372 aaPredicted RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 CASD1Q96PB1 797 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 PPP1R10Q96QC0 940 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 RPS6KC1Q96S38 1066 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 GPR88Q9GZN0 384 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SDCBP2Q9H190 292 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SMYD3Q9H7B4 428 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 KIAA1586Q9HCI6 787 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 IL23AQ9NPF7 189 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 NLRC4Q9NPP4 1024 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 CHST12Q9NRB3 414 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 DNAJB4Q9UDY4 337 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 HMGXB4Q9UGU5 601 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SEPT3Q9UH03 358 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SQORQ9Y6N5 450 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 FNDC1Q4ZHG4 1894 aaPredicted RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 CDH23Q9H251 3354 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 LCHNA4D1U4 455 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 GRXCR1A8MXD5 290 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 NT5C1B-RDH14C9J2C7 533 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 PODXLO00592 558 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 KIF4AO95239 1232 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 RPLP2P05387 115 aaKnown RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 TPM2P07951 284 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 MYOGP15173 224 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 KCNE1P15382 129 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CD58P19256 250 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CDC25BP30305 580 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CASP14P31944 242 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 DEKP35659 375 aaKnown RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 BRCC3P46736 316 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 RGS19P49795 217 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 RAB27AP51159 221 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CLCNKBP51801 687 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 RABGGTBP53611 331 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CDH8P55286 799 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 POLR2FP61218 127 aaKnown RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 FAM189BP81408 668 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 TBX2Q13207 712 aaPredicted RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 IKBKEQ14164 716 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 ZBTB6Q15916 424 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 ARHGAP44Q17R89 818 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 EXOC3L4Q17RC7 722 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 ZNF699Q32M78 642 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 XKR4Q5GH76 650 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 KLHDC7AQ5VTJ3 777 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 C9orf57Q5W0N0 161 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 SPECC1LQ69YQ0 1117 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 PDE12Q6L8Q7 609 aaKnown RBP5.6□□□□□ -1.51
SPG11-220ENST00000559933 PHLDB3Q6NSJ2 640 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 CD300LGQ6UXG3 332 aa5.6□□□□□ -1.51
SPG11-220ENST00000559933 GBP6Q6ZN66 633 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms