RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 NDST1P52848 882 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 TRIP13Q15645 432 aaPredicted RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 ATP13A4Q4VNC1 1196 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 IZUMO3Q5VZ72 239 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 MICALCLQ6ZW33 695 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 PCGF5Q86SE9 256 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 SRLQ86TD4 932 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 ALLCQ8N6M5 410 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 NPLOC4Q8TAT6 608 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 TWNKQ96RR1 684 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 PTPN18Q99952 460 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 NCAPGQ9BPX3 1015 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 METTL5Q9NRN9 209 aaKnown RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 CYTH4Q9UIA0 394 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 MBLAC1A4D2B0 266 aaPredicted RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 GMNCA6NCL1 334 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 LRCH4O75427 683 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 NPTXRO95502 500 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 FAM107AO95990 144 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 ERBB2P04626 1255 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 SMIM10L2AP0DMW4 78 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 SMIM10L2BP0DMW5 78 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 PCK1P35558 622 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 CPT1AP50416 773 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 VCPP55072 806 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 SLC25A11Q02978 314 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 SKIDA1Q1XH10 827 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 MORN1Q5T089 497 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 HIBCHQ6NVY1 386 aaPredicted RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 RAPGEF5Q92565 580 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 AAASQ9NRG9 546 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 KLHL11Q9NVR0 708 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 GNEQ9Y223 722 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 ANK1P16157 1881 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 ZNF236Q9UL36 1845 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 GPR32O75388 356 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 TCEA3O75764 348 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 TCF4P15884 667 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 HOXA11P31270 313 aaPredicted RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 FOXR1Q6PIV2 292 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 ANKS1BQ7Z6G8 1248 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 JOSD2Q8TAC2 188 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 SNX27Q96L92 541 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 KATNAL1Q9BW62 490 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 TRIM6Q9C030 488 aaPredicted RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 RRAGCQ9HB90 399 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 DNPEPQ9ULA0 475 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 TPX2Q9ULW0 747 aaKnown RBP11.87□□□□□ -0.51
CLPX-204ENST00000559152 Q9Y3F1 56 aa11.87□□□□□ -0.51
CLPX-204ENST00000559152 E7EVH7 732 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 DNALI1O14645 258 aaPredicted RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 TRAPPC3O43617 180 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CD4P01730 458 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CYP2C9P11712 490 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 DARSP14868 501 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 KDELR1P24390 212 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 MMP13P45452 471 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ZNF143P52747 638 aaPredicted RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 PLCB3Q01970 1234 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 MORF4L2Q15014 288 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 TAZQ16635 292 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 P3H1Q32P28 736 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 FAM102AQ5T9C2 384 aaPredicted RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ZDHHC17Q8IUH5 632 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 KCTD6Q8NC69 237 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 TTC25Q96NG3 672 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CCT8L2Q96SF2 557 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CNPY3Q9BT09 278 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 PCDH9Q9HC56 1237 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 SNTG2Q9NY99 539 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 HMGXB4Q9UGU5 601 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 GGA2Q9UJY4 613 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 TSPAN16Q9UKR8 245 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 C3orf70A6NLC5 250 aaPredicted RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 SMAPO00193 183 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 GNAT1P11488 350 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 GPD1P21695 349 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 CHKAP35790 457 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 VPS41P49754 854 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ARSEP51690 589 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ORC1Q13415 861 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 AUHQ13825 339 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 MFSD10Q14728 455 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 STAT4Q14765 748 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms