RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CLASP2O75122 1294 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 USP1O94782 785 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 CDH2P19022 906 aaPredicted RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 RFC4P35249 363 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 FMO1Q01740 532 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 SPIRE1Q08AE8 756 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 TMEM62Q0P6H9 643 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 TRIP10Q15642 601 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 BCL2A1Q16548 175 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 MYLK3Q32MK0 819 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 RARS2Q5T160 578 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 RNASEH2BQ5TBB1 312 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 ZFP1Q6P2D0 407 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PRPF39Q86UA1 669 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 TREML1Q86YW5 311 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 ADCY4Q8NFM4 1077 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PYROXD1Q8WU10 500 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 COX4I2Q96KJ9 171 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PWWP2AQ96N64 755 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PAFAH2Q99487 392 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 RUSC1Q9BVN2 902 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PCDH9Q9HC56 1237 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 DDX18Q9NVP1 670 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 UBAP1Q9NZ09 502 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 SCHIP1Q9P0W5 487 aaPredicted RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 PSMD13Q9UNM6 376 aa16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-212ENST00000558662 TXNDC9O14530 226 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 SERPINB7O75635 380 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 LDHCP07864 332 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 FAM58BPP0C7Q3 252 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 PRDX6P30041 224 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 HDAC4P56524 1084 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 NOP14P78316 857 aaKnown RBP16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 CBLBQ13191 982 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 TTC7BQ86TV6 843 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 SHC3Q92529 594 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 DYNLL2Q96FJ2 89 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 OSBPL6Q9BZF3 934 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 VAT1LQ9HCJ6 419 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 PALMDQ9NP74 551 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 ARHGEF38Q9NXL2 777 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 ANAPC7Q9UJX3 599 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 ADAMTS6Q9UKP5 1117 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 CNOT11Q9UKZ1 510 aaKnown RBP16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 TMEM98Q9Y2Y6 226 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 ITGB4P16144 1822 aa16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
HMBOX1-212ENST00000558662 TRIM43BA6NCK2 446 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 E7ESA3 106 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 LIASO43766 372 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PROSCO94903 275 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 RALAP11233 206 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PEX2P28328 305 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PMLP29590 882 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 SLC5A2P31639 672 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PTPN7P35236 360 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 HIF1AQ16665 826 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 KRT39Q6A163 491 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 ZNF677Q86XU0 584 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 CRLF3Q8IUI8 442 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 METTL25Q8N6Q8 603 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 SCAIQ8N9R8 606 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 TTC13Q8NBP0 860 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 DCAKDQ8WVC6 231 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 SPIRE2Q8WWL2 714 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 COA7Q96BR5 231 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PRR11Q96HE9 360 aaPredicted RBP16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 CCT7Q99832 543 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 KLC2Q9H0B6 622 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 TBC1D23Q9NUY8 699 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 CEPT1Q9Y6K0 416 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 WDR91A4D1P6 747 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 ADCY3O60266 1144 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 DNAJA2O60884 412 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 ALOX15P16050 662 aaPredicted RBP16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 ZNF23P17027 643 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 ALDH1A3P47895 512 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 TUBA4AP68366 448 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 RELAQ04206 551 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 CCNIQ14094 377 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 CNGA3Q16281 694 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 FBXL19Q6PCT2 694 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 KBTBD6Q86V97 674 aa16.92■□□□□ 0.3
HMBOX1-212ENST00000558662 RCOR2Q8IZ40 523 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms