RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OSCP1Q8WVF1 389 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ATP2A3Q93084 1043 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SPACA7Q96KW9 195 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SENP8Q96LD8 212 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 NTPCRQ9BSD7 190 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 TPSD1Q9BZJ3 242 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ZCWPW1Q9H0M4 648 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 TMEM60Q9H2L4 133 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 CCDC86Q9H6F5 360 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 RYDENQ9NUL5 291 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 ARHGAP28Q9P2N2 729 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 UXTQ9UBK9 157 aaPredicted RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 TUBGCP4Q9UGJ1 667 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 DSEQ9UL01 958 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SLC6A14Q9UN76 642 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 CCL26Q9Y258 94 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TRAV19A0A0A6YYK7 116 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TTC26A0AVF1 554 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MYMKA6NI61 221 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 LACTBL1A8MY62 500 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 H0YCG3 227 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TULP1O00294 542 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 ABLIM1O14639 778 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 SLC16A4O15374 487 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 HIP1RO75146 1068 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 NFATC1O95644 943 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 CAPNS1P04632 268 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 CYP11A1P05108 521 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 SYPP08247 313 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 SERPINF2P08697 491 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 OR52Z1P0C646 297 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 CXCL8P10145 99 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 FDPSP14324 419 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 BCKDHBP21953 392 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 HOXD12P35452 270 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 RPL10AP62906 217 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 FAM160A1Q05DH4 1040 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MCL1Q07820 350 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 SLC14A1Q13336 389 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 ORC2Q13416 577 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 PDIA5Q14554 519 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MTF1Q14872 753 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 ANKRD1Q15327 319 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TRIP6Q15654 476 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 CRY1Q16526 586 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 ECM1Q16610 540 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 HSF5Q4G112 596 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 SEZ6Q53EL9 994 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 SPATA1Q5VX52 437 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 LYSMD4Q5XG99 296 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TAS1R3Q7RTX0 852 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 RAB44Q7Z6P3 723 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 CD302Q8IX05 232 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TMEFF1Q8IYR6 380 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 PGBD3Q8N328 593 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 CCDC33Q8N5R6 958 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 FSIP1Q8NA03 581 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 OLIG1Q8TAK6 271 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 WHAMMQ8TF30 809 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 SPIRE2Q8WWL2 714 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 ZNF516Q92618 1163 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 TIPINQ9BVW5 301 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 GTPBP2Q9BX10 602 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 RAB34Q9BZG1 259 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 RPF1Q9H9Y2 349 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 POLMQ9NP87 494 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 TMEM74BQ9NUR3 256 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 DDX19AQ9NUU7 478 aaKnown RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 BCCIPQ9P287 314 aaKnown RBP eCLIP5.6□□□□□ -1.51
SPG11-208ENST00000558155 LRWD1Q9UFC0 647 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MBD1Q9UIS9 605 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 PILRBQ9UKJ0 227 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MMP17Q9ULZ9 603 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 MAGED2Q9UNF1 606 aaPredicted RBP5.6□□□□□ -1.51
SPG11-208ENST00000558155 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
SPG11-208ENST00000558155 URB1O60287 2271 aaKnown RBP5.59□□□□□ -1.51
SPG11-208ENST00000558155 ASXL3Q9C0F0 2248 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 MYO18AQ92614 2054 aaKnown RBP5.59□□□□□ -1.51
SPG11-208ENST00000558155 MYH11P35749 1972 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 SHROOM3Q8TF72 1996 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 CEP192Q8TEP8 1941 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 ADAMTS9Q9P2N4 1935 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 SFI1A8K8P3 1242 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 E9PMD0 336 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 K7EQS6 105 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 PIRO00625 290 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 WNT7AO00755 349 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 CYB561D2O14569 222 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 ZBTB24O43167 697 aaPredicted RBP5.59□□□□□ -1.51
SPG11-208ENST00000558155 AP5Z1O43299 807 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 PRPF40AO75400 957 aaKnown RBP5.59□□□□□ -1.51
SPG11-208ENST00000558155 CTDNEP1O95476 244 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 CFIP05156 583 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 PLS3P13797 630 aa5.59□□□□□ -1.51
SPG11-208ENST00000558155 HMGA1P17096 107 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms