RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ENTPD2Q9Y5L3 495 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 VSTM5A8MXK1 200 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 VWC2LB2RUY7 222 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 BTN3A1O00481 513 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 TLR5O60602 858 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 PDHA1P08559 390 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CYP2C9P11712 490 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 XRCC6P12956 609 aaKnown RBP eCLIP4.2□□□□□ -1.74
SPG11-206ENST00000558093 BRAFP15056 766 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 ATF3P18847 181 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CD38P28907 300 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 PPIFP30405 207 aaKnown RBP4.2□□□□□ -1.74
SPG11-206ENST00000558093 ALDH9A1P49189 494 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CLCN2P51788 898 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CACNB3P54284 484 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 BMPR2Q13873 1038 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 E2F2Q14209 437 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 LLGL1Q15334 1064 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CNN3Q15417 329 aaKnown RBP4.2□□□□□ -1.74
SPG11-206ENST00000558093 GFOD2Q3B7J2 385 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 MGAT5BQ3V5L5 792 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 CCDC149Q6ZUS6 474 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 AMIGO2Q86SJ2 522 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 FAM109AQ8N4B1 249 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.2□□□□□ -1.74
SPG11-206ENST00000558093 ZNF384Q8TF68 577 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 BBC3Q96PG8 261 aaPredicted RBP4.2□□□□□ -1.74
SPG11-206ENST00000558093 PTDSS2Q9BVG9 487 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 TRIM54Q9BYV2 358 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 MS4A7Q9GZW8 240 aaPredicted RBP4.2□□□□□ -1.74
SPG11-206ENST00000558093 PRDM13Q9H4Q3 707 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 SEMA4GQ9NTN9 838 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 PAXBP1Q9Y5B6 917 aa4.2□□□□□ -1.74
SPG11-206ENST00000558093 WDR27A2RRH5 827 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 IGLV2-14P01704 120 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 LRPAP1P30533 357 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 CCT8P50990 548 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 PRKAG1P54619 331 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 WNT3P56703 355 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 ZNF362Q5T0B9 420 aaPredicted RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 SYCE2Q6PIF2 218 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 ZNF551Q7Z340 670 aaPredicted RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 RASAL3Q86YV0 1011 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 SLC15A3Q8IY34 581 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 LRRC71Q8N4P6 559 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 IL31RAQ8NI17 732 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 RAPGEF4Q8WZA2 1011 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 TSR2Q969E8 191 aaKnown RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 ZNF764Q96H86 408 aaPredicted RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 SUCLG2Q96I99 432 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 GLOD4Q9HC38 313 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 METTL14Q9HCE5 456 aaKnown RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 SERHLQ9NQF3 203 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 ARHGEF3Q9NR81 526 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 DKK3Q9UBP4 350 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 CCNL1Q9UK58 526 aaPredicted RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 NDRG4Q9ULP0 352 aaKnown RBP4.19□□□□□ -1.74
SPG11-206ENST00000558093 WNT6Q9Y6F9 365 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 COX11Q9Y6N1 276 aa4.19□□□□□ -1.74
SPG11-206ENST00000558093 A0A087WWL8 130 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 hCG_1984214I3L0E3 225 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 MASP2O00187 686 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 MGEA5O60502 916 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 EN2P19622 333 aaPredicted RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 PDE1AP54750 535 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 MRPS21P82921 87 aaKnown RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 CTBP1Q13363 440 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 DEPDC1Q5TB30 811 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 COL23A1Q86Y22 540 aaPredicted RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 KIAA0319LQ8IZA0 1049 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 ATG4AQ8WYN0 398 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 RFKQ969G6 155 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 SARAFQ96BY9 339 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 C22orf23Q9BZE7 217 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 ATP6V0A4Q9HBG4 840 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 PRDM11Q9NQV5 511 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 SACM1LQ9NTJ5 587 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 DDX20Q9UHI6 824 aaKnown RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 OGDHLQ9ULD0 1010 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 TPCN1Q9ULQ1 816 aa4.18□□□□□ -1.74
SPG11-206ENST00000558093 MRPS17Q9Y2R5 130 aaKnown RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 FRMPD2Q68DX3 1309 aaPredicted RBP4.18□□□□□ -1.74
SPG11-206ENST00000558093 QSOX1O00391 747 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 TBX3O15119 743 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 FESP07332 822 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ELFN1P0C7U0 828 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ZKSCAN1P17029 563 aaPredicted RBP4.17□□□□□ -1.74
SPG11-206ENST00000558093 DRD4P21917 467 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 PDE6CP51160 858 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ARFIP2P53365 341 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 SUMO3P55854 103 aaPredicted RBP4.17□□□□□ -1.74
SPG11-206ENST00000558093 SOX10P56693 466 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 KIAA0753Q2KHM9 967 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 PLA1AQ53H76 456 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 TREML2Q5T2D2 321 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 RNF220Q5VTB9 566 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 SWSAP1Q6NVH7 229 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 DARS2Q6PI48 645 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms