RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 TTC39CQ8N584 583 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 KAT5Q92993 513 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
RCCD1-209ENST00000557750 APOL5Q9BWW9 433 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 LSM14BQ9BX40 385 aaKnown RBP13.04□□□□□ -0.32
RCCD1-209ENST00000557750 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
RCCD1-209ENST00000557750 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 GTF3C4Q9UKN8 822 aa13.04□□□□□ -0.32
RCCD1-209ENST00000557750 MYO15AQ9UKN7 3530 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 MYBPHLA2RUH7 354 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 ESPNB1AK53 854 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 PRRG1O14668 218 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 GFRA3O60609 400 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 CILPO75339 1184 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 ABLIM3O94929 683 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 FANCCQ00597 558 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
RCCD1-209ENST00000557750 CCDC142Q17RM4 750 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 ANKRD54Q6NXT1 300 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 SYCE2Q6PIF2 218 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 ATAD1Q8NBU5 361 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 B3GALNT2Q8NCR0 500 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 PLEKHA4Q9H4M7 779 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 GRPEL1Q9HAV7 217 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 CRTAC1Q9NQ79 661 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 DZANK1Q9NVP4 752 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 ABI2Q9NYB9 513 aaPredicted RBP13.03□□□□□ -0.32
RCCD1-209ENST00000557750 DMDP11532 3685 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 SPTBN4Q9H254 2564 aa13.03□□□□□ -0.32
RCCD1-209ENST00000557750 MTMR11A4FU01 709 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 C1RP00736 705 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 C8AP07357 584 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 PTPN1P18031 435 aaKnown RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 MFAP3P55082 362 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 CYP27A1Q02318 531 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 SMARCB1Q12824 385 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 DUSP4Q13115 394 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 SYCP1Q15431 976 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 MAPRE1Q15691 268 aaKnown RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 MDH1BQ5I0G3 518 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 ACOT1Q86TX2 421 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 SPATA2LQ8IUW3 424 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 ATOH1Q92858 354 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 FAM81BQ96LP2 452 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 TWNKQ96RR1 684 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-209ENST00000557750 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.32
RCCD1-209ENST00000557750 A0A1B0GTH6 734 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 TEX33O43247 280 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SEC24AO95486 1093 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 KRT5P13647 590 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 KLK7P49862 253 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 UBASH3AP57075 661 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 FAM171BQ6P995 826 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 TMEM270Q6UE05 265 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 C4orf50Q6ZRC1 276 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 ENOSF1Q7L5Y1 443 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
RCCD1-209ENST00000557750 HDAC7Q8WUI4 952 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 KREMEN1Q96MU8 473 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 PKMYT1Q99640 499 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
RCCD1-209ENST00000557750 ELOVL4Q9GZR5 314 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SFXN1Q9H9B4 322 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
RCCD1-209ENST00000557750 TSC2P49815 1807 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
RCCD1-209ENST00000557750 H0Y858 1186 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 RFPL2O75678 378 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 VNN2O95498 520 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 TERF1P54274 439 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
RCCD1-209ENST00000557750 RAPGEF1Q13905 1077 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms