RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 DCP1BQ8IZD4 617 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 C2orf15Q8WU43 125 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 POMGNT1Q8WZA1 660 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 MRPS31Q92665 395 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 ZC3H10Q96K80 434 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 DUS2Q9NX74 493 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 DDX43Q9NXZ2 648 aaKnown RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 GTF3C4Q9UKN8 822 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 AGAP1Q9UPQ3 857 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
LGMN-219ENST00000557725 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
LGMN-219ENST00000557725 PTPRDP23468 1912 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 C4orf47A7E2U8 309 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 ATG13O75143 517 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 ATP2C2O75185 946 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 NOL4O94818 638 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 CSH1P0DML2 217 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 CSH2P0DML3 217 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 DRD1P21728 446 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 BCKDHBP21953 392 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 CASP5P51878 434 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 DGKEP52429 567 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 ZXDBP98169 803 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 TSPY1Q01534 308 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 USP4Q13107 963 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 EML3Q32P44 896 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 NOC3LQ8WTT2 800 aaKnown RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 OSCP1Q8WVF1 389 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
LGMN-219ENST00000557725 CD101Q93033 1021 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 AK8Q96MA6 479 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 FGFBP2Q9BYJ0 223 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
LGMN-219ENST00000557725 IGF2RP11717 2491 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.41
LGMN-219ENST00000557725 PPP1R37O75864 691 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 AKAP3O75969 853 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 APBB3O95704 486 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 CAVIN2O95810 425 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 CKMP06732 381 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
LGMN-219ENST00000557725 PAX3P23760 479 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 DDX6P26196 483 aaKnown RBP eCLIP12.46□□□□□ -0.41
LGMN-219ENST00000557725 GBP1P32455 592 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 IFNAR2P48551 515 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 SHC2P98077 582 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 MESP2Q0VG99 397 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 PDGFRLQ15198 375 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
LGMN-219ENST00000557725 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 ZNF720Q7Z2F6 126 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 TTC30AQ86WT1 665 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 SCN4BQ8IWT1 228 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 CPA6Q8N4T0 437 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 CXorf38Q8TB03 319 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 GCNT4Q9P109 453 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
LGMN-219ENST00000557725 PTPRJQ12913 1337 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 LNP1A1A4G5 178 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 MYMKA6NI61 221 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 IL18RAPO95256 599 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 KRT19P08727 400 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 DDIT3P35638 169 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 OPRD1P41143 372 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
LGMN-219ENST00000557725 USP46P62068 366 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 PSMC1P62191 440 aaKnown RBP12.45□□□□□ -0.42
LGMN-219ENST00000557725 SMARCB1Q12824 385 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 FOXC1Q12948 553 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
LGMN-219ENST00000557725 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
LGMN-219ENST00000557725 ELF2Q15723 593 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 GAB4Q2WGN9 574 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 C2orf27AQ580R0 203 aa12.45□□□□□ -0.42
LGMN-219ENST00000557725 SLFN12LQ6IEE8 588 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms