RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 TAF12Q16514 161 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 PRSS36Q5K4E3 855 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 FGF13Q92913 245 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 FAXDC2Q96IV6 333 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 TNIP3Q96KP6 325 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 DNAI2Q9GZS0 605 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 EPHX3Q9H6B9 360 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 TMLHEQ9NVH6 421 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-211ENST00000557623 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 RWDD2AQ9UIY3 292 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 ZNF638Q14966 1978 aaKnown RBP13.34□□□□□ -0.27
SLIRP-211ENST00000557623 OBSL1O75147 1896 aa13.33□□□□□ -0.27
SLIRP-211ENST00000557623 MYBPHLA2RUH7 354 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 MBD3O95983 291 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 MYL4P12829 197 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 MAGEA11P43364 429 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
SLIRP-211ENST00000557623 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
SLIRP-211ENST00000557623 ZXDAP98168 799 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 WDR44Q5JSH3 913 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 MTSS1LQ765P7 747 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 DNAJB7Q7Z6W7 309 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-211ENST00000557623 UBALD2Q8IYN6 164 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 TTC9BQ8N6N2 239 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 MYCBPAPQ8TBZ2 947 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 EDAQ92838 391 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 SMYD3Q9H7B4 428 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
SLIRP-211ENST00000557623 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-211ENST00000557623 HCRTO43612 131 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 ATP2C2O75185 946 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SOAT2O75908 522 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 ASGR2P07307 311 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CSH1P0DML2 217 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CSH2P0DML3 217 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 PTPN1P18031 435 aaKnown RBP13.32□□□□□ -0.28
SLIRP-211ENST00000557623 ATF6P18850 670 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CDH8P55286 799 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 NLRP12P59046 1061 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CYP27A1Q02318 531 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CETN1Q12798 172 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 TDGQ13569 410 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SLC5A9Q2M3M2 681 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SCARA5Q6ZMJ2 495 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 NPAS3Q8IXF0 933 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 TTC39CQ8N584 583 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 ING5Q8WYH8 240 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SLC35C1Q96A29 364 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CEP295NLQ96MC4 621 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 GCNAQ96QF7 691 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
SLIRP-211ENST00000557623 LRRC3Q9BY71 257 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 BCO2Q9BYV7 579 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 NIF3L1Q9GZT8 377 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 COQ4Q9Y3A0 265 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 A0A0C4DFX4 3053 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
SLIRP-211ENST00000557623 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 ANHXE9PGG2 379 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 PMM2O15305 246 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 GPR37L1O60883 481 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 CEBPBP17676 345 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 CYP2F1P24903 491 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 ASPAP45381 313 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 CDR1P51861 262 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 CT47A1Q5JQC4 288 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 LPIN3Q9BQK8 851 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 SDCBP2Q9H190 292 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms