RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RAP1GAPP47736 663 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PXNP49023 591 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TNK2Q07912 1038 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PSMD2Q13200 908 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 EML3Q32P44 896 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF568Q3ZCX4 644 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PKN3Q6P5Z2 889 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 CENPQQ7L2Z9 268 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 APBB1IPQ7Z5R6 666 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 KBTBD6Q86V97 674 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 RALGPS2Q86X27 583 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TMC8Q8IU68 726 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ARID3BQ8IVW6 561 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TMEM130Q8N3G9 435 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ZSCAN1Q8NBB4 408 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 BEST2Q8NFU1 509 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 GAB3Q8WWW8 586 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 E2F7Q96AV8 911 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 LOXL4Q96JB6 756 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 IFT74Q96LB3 600 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TBC1D32Q96NH3 1257 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ACO2Q99798 780 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 MKNK1Q9BUB5 465 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 POLR3CQ9BUI4 534 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 CCDC94Q9BW85 323 aaPredicted RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 LSM14BQ9BX40 385 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 RBCK1Q9BYM8 510 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TM6SF1Q9BZW5 370 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 GPR88Q9GZN0 384 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 DNAJC25Q9H1X3 360 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 CRISPLD1Q9H336 500 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PTPRHQ9HD43 1115 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 TPCN1Q9ULQ1 816 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 MAFFQ9ULX9 164 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PCDHB9Q9Y5E1 797 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 GREB1Q4ZG55 1949 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 NBEAQ8NFP9 2946 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ITPR1Q14643 2758 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 SPAG17Q6Q759 2223 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PDCD11Q14690 1871 aaKnown RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PHLPP2Q6ZVD8 1323 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 K7ERI5 159 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 ABLIM1O14639 778 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 DNAJC6O75061 913 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PRAMEF12O95522 483 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 CCDC192P0DO97 292 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PROZP22891 400 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 RPA1P27694 616 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 MPLP40238 635 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 EPHB3P54753 998 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 CLDN10P78369 228 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TCEAL6Q6IPX3 200 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PSAPL1Q6NUJ1 521 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 UNQ6494/PRO21346Q6UXR6 183 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 GAREM2Q75VX8 874 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 CACNA2D4Q7Z3S7 1137 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 DIS3L2Q8IYB7 885 aaKnown RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 SYNPOQ8N3V7 929 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TTC9BQ8N6N2 239 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PLPP7Q8NBV4 271 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 APPL2Q8NEU8 664 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 ERMNQ8TAM6 284 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 WASF1Q92558 559 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 KIFAP3Q92845 792 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PMM1Q92871 262 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TCEAL3Q969E4 200 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 PGLYRP2Q96PD5 576 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 DUSP9Q99956 384 aaKnown RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TARS2Q9BW92 718 aaKnown RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 MRPL4Q9BYD3 311 aaKnown RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 BHMT2Q9H2M3 363 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 POLR3BQ9NW08 1133 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TUBGCP4Q9UGJ1 667 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 TIMM13Q9Y5L4 95 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-207ENST00000557470 DMXL2Q8TDJ6 3036 aa6.37□□□□□ -1.39
VPS33B-207ENST00000557470 WDFY3Q8IZQ1 3526 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 CCDC169A6NNP5 214 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 M0QZQ0 153 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 GIPC1O14908 333 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SOAT2O75908 522 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 OAZ2O95190 189 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 MCF2P10911 925 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 HARSP12081 509 aaKnown RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SPINK2P20155 84 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 MARCKSP29966 332 aaPredicted RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ALDH1A3P47895 512 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 NPTX2P47972 431 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 NOVA1P51513 510 aaKnown RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SEC13P55735 322 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 DAB2P98082 770 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 CYP4F8P98187 520 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 YWHAHQ04917 246 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms