RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.37□□□□□ -1.07
PSEN1-222ENST00000557356 TRANK1O15050 2925 aa8.37□□□□□ -1.07
PSEN1-222ENST00000557356 VWA8A3KMH1 1905 aa8.37□□□□□ -1.07
PSEN1-222ENST00000557356 RTN3O95197 1032 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-222ENST00000557356 VNN2O95498 520 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 ASGR2P07307 311 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 TRIM49P0CI25 452 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 TRIM49CP0CI26 452 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 PTMSP20962 102 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 RFX1P22670 979 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 CYP2F1P24903 491 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 GABRR2P28476 465 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 PMS1P54277 932 aaKnown RBP8.36□□□□□ -1.07
PSEN1-222ENST00000557356 MARSP56192 900 aaKnown RBP8.36□□□□□ -1.07
PSEN1-222ENST00000557356 SLC8A3P57103 927 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 HTR4Q13639 388 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 C1orf220Q5T0J3 134 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 C1orf228Q6PIY5 440 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 SCN4BQ8IWT1 228 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 YAF2Q8IY57 180 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 FBXL6Q8N531 539 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 TAS1R2Q8TE23 839 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 KHSRPQ92945 711 aaKnown RBP eCLIP8.36□□□□□ -1.071e-7■■■■□ 24
PSEN1-222ENST00000557356 IRF7Q92985 503 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 SLC35C1Q96A29 364 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 EEF2KMTQ96G04 330 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 PCED1BQ96HM7 432 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 NELL2Q99435 816 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 MRPL45Q9BRJ2 306 aaKnown RBP8.36□□□□□ -1.07
PSEN1-222ENST00000557356 LRFN3Q9BTN0 628 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 ANP32EQ9BTT0 268 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 MED10Q9BTT4 135 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 TRMT61BQ9BVS5 477 aaKnown RBP8.36□□□□□ -1.07
PSEN1-222ENST00000557356 LRRC3Q9BY71 257 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 IRF2BPLQ9H1B7 796 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 MFSD1Q9H3U5 465 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 MMRN2Q9H8L6 949 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 TMLHEQ9NVH6 421 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 NUMBLQ9Y6R0 609 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 ANK1P16157 1881 aa8.36□□□□□ -1.07
PSEN1-222ENST00000557356 LAMA2P24043 3122 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 PLXNA3P51805 1871 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 TRIM49BA6NDI0 452 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SLC38A8A6NNN8 435 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ATP2C2O75185 946 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 NOL4O94818 638 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 GLULP15104 373 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CD44P16070 742 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 PSMC3P17980 439 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ATF6P18850 670 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 BMP6P22004 513 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 BDNFP23560 247 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 AVPR1AP37288 418 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 FMO5P49326 533 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CLCN5P51795 746 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 NDST1P52848 882 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CDH8P55286 799 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 NLRP12P59046 1061 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 PSMC1P62191 440 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 INCA1Q0VD86 236 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 DDR2Q16832 855 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 MDH1BQ5I0G3 518 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 PARM1Q6UWI2 310 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 DENND5BQ6ZUT9 1274 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 MON1AQ86VX9 555 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 OSTM1Q86WC4 334 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ARID3BQ8IVW6 561 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 TTC9BQ8N6N2 239 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CELF5Q8N6W0 485 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 STKLD1Q8NE28 680 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 PDZD8Q8NEN9 1154 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SHKBP1Q8TBC3 707 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ZSCAN18Q8TBC5 510 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ING5Q8WYH8 240 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 OVCA2Q8WZ82 227 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 MYLPFQ96A32 169 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 EXOC4Q96A65 974 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 JAKMIP2Q96AA8 810 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SMARCD1Q96GM5 515 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 ASB16Q96NS5 453 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 SLITRK1Q96PX8 696 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 HNRNPABQ99729 332 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CRISPLD1Q9H336 500 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 FBXO44Q9H4M3 255 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 KIF9Q9HAQ2 790 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 DMAP1Q9NPF5 467 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CRTAC1Q9NQ79 661 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 TRPV5Q9NQA5 729 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
PSEN1-222ENST00000557356 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-222ENST00000557356 CTNND2Q9UQB3 1225 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms