RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KCNJ5P48544 419 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 NEK2P51955 445 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 ATAT1Q5SQI0 421 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 PRAMEF17Q5VTA0 474 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 ZNF626Q68DY1 528 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 PLBD2Q8NHP8 589 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 MAP3K14Q99558 947 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 CGRRF1Q99675 332 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 SARS2Q9NP81 518 aaKnown RBP5.36□□□□□ -1.55
VRK1-207ENST00000557352 IP6K2Q9UHH9 426 aa5.36□□□□□ -1.55
VRK1-207ENST00000557352 SMIM22K7EJ46 135 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 PF4V1P10720 104 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 ENGP17813 658 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 ITGB6P18564 788 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 EPHB2P29323 1055 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 MPGP29372 298 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 VIPR2P41587 438 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 TUBA4AP68366 448 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 PTPROQ16827 1216 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 PCID2Q5JVF3 399 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 RGS7BPQ6MZT1 257 aaPredicted RBP5.35□□□□□ -1.55
VRK1-207ENST00000557352 GRAMD1CQ8IYS0 662 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 LRRC71Q8N4P6 559 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 MOGAT1Q96PD6 335 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
VRK1-207ENST00000557352 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 ARMT1Q9H993 441 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 AASDHPPTQ9NRN7 309 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 XPR1Q9UBH6 696 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 NDRG4Q9ULP0 352 aaKnown RBP5.35□□□□□ -1.55
VRK1-207ENST00000557352 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 STXBP5LQ9Y2K9 1186 aa5.35□□□□□ -1.55
VRK1-207ENST00000557352 CCDC180Q9P1Z9 1646 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 A1L4Q6 167 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 ERC2O15083 957 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 TP73O15350 636 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 CERS1P27544 350 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 PDE1AP54750 535 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 CYP4F2P78329 520 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 E2F2Q14209 437 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 C11orf87Q6NUJ2 197 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 PARS2Q7L3T8 475 aaKnown RBP5.34□□□□□ -1.55
VRK1-207ENST00000557352 YTHDF3Q7Z739 585 aaKnown RBP5.34□□□□□ -1.55
VRK1-207ENST00000557352 NEK8Q86SG6 692 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
VRK1-207ENST00000557352 GLG1Q92896 1179 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 MTFMTQ96DP5 389 aaKnown RBP5.34□□□□□ -1.55
VRK1-207ENST00000557352 HOOK2Q96ED9 719 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 C1GALT1C1Q96EU7 318 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 FSD1LQ9BXM9 530 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 GLOD4Q9HC38 313 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 BTBD3Q9Y2F9 522 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 MED16Q9Y2X0 877 aa5.34□□□□□ -1.55
VRK1-207ENST00000557352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.34□□□□□ -1.55
VRK1-207ENST00000557352 PRRT4C9JH25 899 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 hCG_1984214I3L0E3 225 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 ABLIM3O94929 683 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 CYP2D6P10635 497 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 KLF9Q13886 244 aaPredicted RBP5.33□□□□□ -1.56
VRK1-207ENST00000557352 ZNF267Q14586 743 aaPredicted RBP5.33□□□□□ -1.56
VRK1-207ENST00000557352 CEP78Q5JTW2 689 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 NAPRTQ6XQN6 538 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 RP9Q8TA86 221 aaKnown RBP5.33□□□□□ -1.56
VRK1-207ENST00000557352 R3HDM4Q96D70 268 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 GPATCH3Q96I76 525 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 MRGPRX1Q96LB2 322 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 MACROD1Q9BQ69 325 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 QTRT1Q9BXR0 403 aaKnown RBP5.33□□□□□ -1.56
VRK1-207ENST00000557352 SLC12A5Q9H2X9 1139 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 ADAMTS5Q9UNA0 930 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 SHOC2Q9UQ13 582 aa5.33□□□□□ -1.56
VRK1-207ENST00000557352 MRPS17Q9Y2R5 130 aaKnown RBP5.33□□□□□ -1.56
VRK1-207ENST00000557352 MYO1FO00160 1098 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 PPP6CO00743 305 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 OFD1O75665 1012 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 UCP3P55916 312 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
VRK1-207ENST00000557352 SUPT20HL1Q3ZLR7 823 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 IFIT1BQ5T764 474 aaKnown RBP5.32□□□□□ -1.56
VRK1-207ENST00000557352 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
VRK1-207ENST00000557352 SH2D3AQ9BRG2 576 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 NRIP3Q9NQ35 241 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 TMX2Q9Y320 296 aa5.32□□□□□ -1.56
VRK1-207ENST00000557352 A0A088AWK7 358 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 ADAMTS3O15072 1205 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 TUBB4AP04350 444 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 THP07101 528 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 CSF1RP07333 972 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 NPSP0C0P6 89 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 LRPAP1P30533 357 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 SLC11A2P49281 568 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 KRTAP10-9P60411 292 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 RAB1AP62820 205 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 MYO1EQ12965 1108 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 FGL2Q14314 439 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 ETFDHQ16134 617 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 MORN5Q5VZ52 161 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 SLC18B1Q6NT16 456 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms