RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SWSAP1Q6NVH7 229 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 GLB1LQ6UWU2 654 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 MPZL3Q6UWV2 235 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 ATG4DQ86TL0 474 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 TSPYL5Q86VY4 417 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 ZBTB44Q8NCP5 570 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 CTCFLQ8NI51 663 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 FEZF2Q8TBJ5 459 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 HDAC7Q8WUI4 952 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 SLC6A18Q96N87 628 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 FAM210AQ96ND0 272 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 MYADMQ96S97 322 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 PPP1R16BQ96T49 567 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 NELL2Q99435 816 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 DUSP15Q9H1R2 295 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 ADAMTS10Q9H324 1103 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 MRPL17Q9NRX2 175 aaKnown RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 DIAPH3Q9NSV4 1193 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 KIAA1522Q9P206 1035 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 CGNQ9P2M7 1197 aaKnown RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 ZFP37Q9Y6Q3 630 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-247ENST00000557311 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
ATXN3-247ENST00000557311 TPRP12270 2363 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 SLC30A4O14863 429 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 NCAM2O15394 837 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF623O75123 536 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 OFD1O75665 1012 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 PAPLNO95428 1278 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 DARSP14868 501 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 GPC5P78333 572 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 UBE2SQ16763 222 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 CDCP2Q5VXM1 449 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 RSPO2Q6UXX9 243 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 CKAP2LQ8IYA6 745 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 IGDCC4Q8TDY8 1250 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 NELL1Q92832 810 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 KIRREL1Q96J84 757 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 DHRS1Q96LJ7 313 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 GPR62Q9BZJ7 368 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 PLEKHA4Q9H4M7 779 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 NRBP2Q9NSY0 501 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 TBC1D13Q9NVG8 400 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 ZMYM5Q9UJ78 669 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 GMEB2Q9UKD1 530 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 SMG5Q9UPR3 1016 aaKnown RBP5.43□□□□□ -1.54
ATXN3-247ENST00000557311 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 CLUHO75153 1309 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 NLRC5Q86WI3 1866 aa5.43□□□□□ -1.54
ATXN3-247ENST00000557311 MYH7P12883 1935 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 KIAA1217Q5T5P2 1943 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GOLGA6CA6NDK9 693 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GOLGA6BA6NDN3 693 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 INPPL1O15357 1258 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 KIF1CO43896 1103 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RFPL2O75678 378 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 DDAH1O94760 285 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GLUD1P00367 558 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ESR1P03372 595 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 TP53P04637 393 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 URODP06132 367 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GOLGA6DP0CG33 693 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RPL10P27635 214 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SLC11A1P49279 550 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RAB27AP51159 221 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 GPC3P51654 580 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 CLCN3P51790 818 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 AK2P54819 239 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 PFKPQ01813 784 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 DMWDQ09019 674 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 SNW1Q13573 536 aaKnown RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 HTR4Q13639 388 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 COL9A2Q14055 689 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-247ENST00000557311 PPP2R5EQ16537 467 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 RALGPS1Q5JS13 557 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 ZBTB41Q5SVQ8 909 aa5.42□□□□□ -1.54
ATXN3-247ENST00000557311 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms