RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ATP2A3Q93084 1043 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 SLC22A12Q96S37 553 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 FIZ1Q96SL8 496 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 LINC00597Q9H2U6 94 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 UXTQ9UBK9 157 aaPredicted RBP13.24□□□□□ -0.29
SNX6-209ENST00000557265 AGO2Q9UKV8 859 aaKnown RBP13.24□□□□□ -0.29
SNX6-209ENST00000557265 WASF3Q9UPY6 502 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 STYXL1Q9Y6J8 313 aa13.24□□□□□ -0.29
SNX6-209ENST00000557265 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
SNX6-209ENST00000557265 TRAV19A0A0A6YYK7 116 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 TBCAO75347 108 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 CKMP06732 381 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 ABCD1P33897 745 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 UBA7P41226 1012 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 NR1H3Q13133 447 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 MCM6Q14566 821 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 EML3Q32P44 896 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 C2orf27AQ580R0 203 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 PMS2CLQ68D20 193 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 CRELD2Q6UXH1 353 aaPredicted RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 CALML4Q96GE6 196 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 TRMT2BQ96GJ1 504 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 MYRFLQ96LU7 910 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 AK8Q96MA6 479 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 ACBD6Q9BR61 282 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 TMEM206Q9H813 350 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 TMEM9BQ9NQ34 198 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 DDX43Q9NXZ2 648 aaKnown RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
SNX6-209ENST00000557265 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
SNX6-209ENST00000557265 PATE3B3GLJ2 98 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
SNX6-209ENST00000557265 SLC26A4O43511 780 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 CEACAM1P13688 526 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
SNX6-209ENST00000557265 BCKDHBP21953 392 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 PNPLA4P41247 253 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 SEC13P55735 322 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 IRX4P78413 519 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
SNX6-209ENST00000557265 USP4Q13107 963 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 COL9A2Q14055 689 aaPredicted RBP13.22□□□□□ -0.29
SNX6-209ENST00000557265 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 CCDC26Q8TAB7 109 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
SNX6-209ENST00000557265 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 GTF3C4Q9UKN8 822 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 L1RE1Q9UN81 338 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
SNX6-209ENST00000557265 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 ANTXRLA6NF34 631 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 K7EQS6 105 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 IL18RAPO95256 599 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 HDCP19113 662 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 PLCG1P19174 1290 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 ADSSP30520 456 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 TFAMQ00059 246 aaKnown RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 MYL7Q01449 175 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 CCDC142Q17RM4 750 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 INTS6LQ5JSJ4 861 aaKnown RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 SCARA3Q6AZY7 606 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 RASSF3Q86WH2 238 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 PIGKQ92643 395 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 RAD54LQ92698 747 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 CNOT6LQ96LI5 555 aaKnown RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 PKMYT1Q99640 499 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 SCNM1Q9BWG6 230 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
SNX6-209ENST00000557265 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 SPAG17Q6Q759 2223 aa13.21□□□□□ -0.29
SNX6-209ENST00000557265 HCRTO43612 131 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 HUS1O60921 280 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 NFATC1O95644 943 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 ITGB3P05106 788 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 HOXB3P14651 431 aaPredicted RBP13.2□□□□□ -0.3
SNX6-209ENST00000557265 OPRD1P41143 372 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 WNT7BP56706 349 aa13.2□□□□□ -0.3
SNX6-209ENST00000557265 KCNB1Q14721 858 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms