RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 PBX4Q9BYU1 374 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 TRIM55Q9BYV6 548 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 CEP44Q9C0F1 390 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 DDX47Q9H0S4 455 aaKnown RBP4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 VPS16Q9H269 839 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 TLE6Q9H808 572 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 PALMDQ9NP74 551 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ABHD10Q9NUJ1 306 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ABCF3Q9NUQ8 709 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 TBC1D23Q9NUY8 699 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 DCAF16Q9NXF7 216 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ABI2Q9NYB9 513 aaPredicted RBP4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 DNAJB4Q9UDY4 337 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 LNPEPQ9UIQ6 1025 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ACAD8Q9UKU7 415 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ASAP1Q9ULH1 1129 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 GUCA1BQ9UMX6 200 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 STX8Q9UNK0 236 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ZBTB1Q9Y2K1 713 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 COQ6Q9Y2Z9 468 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 RABGAP1Q9Y3P9 1069 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 EPN1Q9Y6I3 576 aaPredicted RBP4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 GAKO14976 1311 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ANKRD31Q8N7Z5 1873 aa4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 USP9XQ93008 2570 aaPredicted RBP4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 ZFHX2Q9C0A1 2572 aaPredicted RBP4.85□□□□□ -1.63
HNRNPC-229ENST00000557157 DMDP11532 3685 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM208BQ5VWN6 2430 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 PSME4Q14997 1843 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 A0A1W2PP64 1363 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF536O15090 1300 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 USP42Q9H9J4 1324 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MACROD2A1Z1Q3 448 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 FUOMA2VDF0 154 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ANKRD34BA5PLL1 514 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 PRR19A6NJB7 356 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 H3BRJ5 948 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 AP3B1O00203 1094 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 PDE2AO00408 941 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CHL1O00533 1208 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 TRAFD1O14545 582 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CPLX1O14810 134 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 AREL1O15033 823 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 SPTLC2O15270 562 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 AP1G1O43747 822 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF862O60290 1169 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ZC3H11AO75152 810 aaKnown RBP eCLIP4.84□□□□□ -1.635e-13■■□□□ 12.3
HNRNPC-229ENST00000557157 HEXIM1O94992 359 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 STAMBPO95630 424 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 TFRCP02786 760 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 LDHCP07864 332 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 SPATA31D3P0C874 917 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 BMP3P12645 472 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 IL32P24001 234 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MZF1P28698 734 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 GTF2H1P32780 548 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CSTF2P33240 577 aaKnown RBP eCLIP4.84□□□□□ -1.632e-10■■□□□ 11.7
HNRNPC-229ENST00000557157 CTNNA1P35221 906 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 RFC4P35249 363 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MMP13P45452 471 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MAPK8P45983 427 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ID4P47928 161 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 TM4SF4P48230 202 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 GSSP48637 474 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 TUFMP49411 452 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MTHFSP49914 203 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 PLCD1P51178 756 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 DSTNP60981 165 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ERVK-24P63145 666 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 MRPS5P82675 430 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 DSG1Q02413 1049 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 EHHADHQ08426 723 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 NMIQ13287 307 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 GRM2Q14416 872 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 TNIP1Q15025 636 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 NECTIN1Q15223 517 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 EPHA7Q15375 998 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CRY1Q16526 586 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ST3GAL2Q16842 350 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 INSCQ1MX18 579 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CFAP221Q4G0U5 840 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 SGO2Q562F6 1265 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 HERC4Q5GLZ8 1057 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CYP4A22Q5TCH4 519 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 RESP18Q5W5W9 173 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CCDC81Q6ZN84 652 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ARHGEF18Q6ZSZ5 1173 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 SPATA31D4Q6ZUB0 917 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 INTS8Q75QN2 995 aaKnown RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 NET1Q7Z628 596 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 SLC51BQ86UW2 128 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 ITIH5Q86UX2 942 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CREG2Q8IUH2 290 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 LRRC34Q8IZ02 419 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 C7orf61Q8IZ16 206 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 CARNMT1Q8N4J0 409 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 LSMEM1Q8N8F7 131 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 LINC00301Q8NCQ3 95 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 BBOF1Q8ND07 529 aa4.84□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM13CQ8NE31 585 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms