RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NRBP1Q9UHY1 535 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 DNM3Q9UQ16 869 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 DOCK2Q92608 1830 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 KRIT1O00522 736 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 CCP110O43303 1012 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 NARSO43776 548 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 SLC37A4O43826 429 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KIF20AO95235 890 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 IL18BPO95998 194 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 CFBP00751 764 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 TUBB4AP04350 444 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 TPM2P07951 284 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 ATP1A3P13637 1013 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 MUTP22033 750 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SFPQP23246 707 aaKnown RBP eCLIP4.92□□□□□ -1.62
SRP54-212ENST00000556992 EEF1GP26641 437 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 HOXA13P31271 388 aaPredicted RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 PRCPP42785 496 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 TERF1P54274 439 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 BACE1P56817 501 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 RBM10P98175 930 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 PFKPQ01813 784 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SPP2Q13103 211 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 TUSC3Q13454 348 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 COG2Q14746 738 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 TMEM119Q4V9L6 283 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 PAN2Q504Q3 1202 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 KIAA1755Q5JYT7 1200 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 AGBL4Q5VU57 503 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 HAUS3Q68CZ6 603 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SPECC1LQ69YQ0 1117 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KLHL10Q6JEL2 608 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 XRRA1Q6P2D8 792 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 CCDC174Q6PII3 467 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 FOXR2Q6PJQ5 311 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KRT26Q7Z3Y9 468 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 VSTM4Q8IW00 320 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 FAM114A1Q8IWE2 563 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SCYL3Q8IZE3 742 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 CCDC112Q8NEF3 446 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 CACTINQ8WUQ7 758 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 NELFBQ8WX92 580 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 RAD54LQ92698 747 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 DCPSQ96C86 337 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 NEIL1Q96FI4 390 aaPredicted RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 AJUBAQ96IF1 538 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 NAP1L5Q96NT1 182 aaPredicted RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 RIT2Q99578 217 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KCNJ15Q99712 375 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 DPYSL5Q9BPU6 564 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 POLR3CQ9BUI4 534 aaPredicted RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 HSD3B7Q9H2F3 369 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 THAP9Q9H5L6 903 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SEC61A2Q9H9S3 476 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SLC6A20Q9NP91 592 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KCND1Q9NSA2 647 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 SAMSN1Q9NSI8 373 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 ACTR10Q9NZ32 417 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 MAGEC2Q9UBF1 373 aaPredicted RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 LIMA1Q9UHB6 759 aaKnown RBP4.92□□□□□ -1.62
SRP54-212ENST00000556992 A0A0C4DFX4 3053 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 KDM3AQ9Y4C1 1321 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 LRRC37AA6NMS7 1700 aa4.92□□□□□ -1.62
SRP54-212ENST00000556992 RGPD3A6NKT7 1758 aaPredicted RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 RGPD4Q7Z3J3 1758 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 SHTN1A0MZ66 631 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 FAM86B1E9PN63 330 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 NKRFO15226 690 aaKnown RBP eCLIP4.91□□□□□ -1.62
SRP54-212ENST00000556992 MSH4O15457 936 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 KLRC4O43908 158 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 FLOT1O75955 427 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 TPM1P09493 284 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 C1SP09871 688 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 FAM86B2P0C5J1 330 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 PLA2G4BP0C869 781 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 FAHP16930 419 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 ACO1P21399 889 aaKnown RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 CCNE1P24864 410 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 RPA1P27694 616 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CASP1P29466 404 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 HSD17B4P51659 736 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 OAZ1P54368 228 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 STX17P56962 302 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 ASIC1P78348 528 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 GHRHRQ02643 423 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 ABHD18Q0P651 414 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 TBX2Q13207 712 aaPredicted RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CCDC144BQ3MJ40 725 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CEP55Q53EZ4 464 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 TCP11X2Q5H9J9 407 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 DNTTIP2Q5QJE6 756 aaKnown RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 CD276Q5ZPR3 534 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 USP53Q70EK8 1073 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 UNC13DQ70J99 1090 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 NIPA1Q7RTP0 329 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CCDC65Q8IXS2 484 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 GUF1Q8N442 669 aaKnown RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 ETNPPLQ8TBG4 499 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms