RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DDR2Q16832 855 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 TPD52L1Q16890 204 aaPredicted RBP11.39□□□□□ -0.59
LINC00239-201ENST00000556973 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MDH1BQ5I0G3 518 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 SASS6Q6UVJ0 657 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 SCARA5Q6ZMJ2 495 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 TMC8Q8IU68 726 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 UBALD2Q8IYN6 164 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 CRYBG2Q8N1P7 616 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 TTC39CQ8N584 583 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 GIPC2Q8TF65 315 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MCRS1Q96EZ8 462 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 C1QTNF1Q9BXJ1 281 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 DPEP3Q9H4B8 488 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00239-201ENST00000556973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00239-201ENST00000556973 DOCK8Q8NF50 2099 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 A0A0C4DFX4 3053 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MOSPD3O75425 235 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 AFPP02771 609 aaKnown RBP11.38□□□□□ -0.59
LINC00239-201ENST00000556973 ASGR2P07307 311 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 BDNFP23560 247 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 GRIK1P39086 918 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 CCR2P41597 374 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 NDST1P52848 882 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 INCA1Q0VD86 236 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 MTSS1LQ765P7 747 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 ACOT1Q86TX2 421 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 FAM114A1Q8IWE2 563 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 SLC44A3Q8N4M1 653 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 GPR152Q8TDT2 470 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 ING5Q8WYH8 240 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 TATDN2Q93075 761 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 TCEAL4Q96EI5 215 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 SPATA17Q96L03 361 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 B3GNT5Q9BYG0 378 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 ELOVL4Q9GZR5 314 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 THAP9Q9H5L6 903 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 GREB1Q4ZG55 1949 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
LINC00239-201ENST00000556973 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 A0A1W2PRU2 124 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 SLC38A8A6NNN8 435 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 TRIM66O15016 1216 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 GPR37L1O60883 481 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 CILPO75339 1184 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 NOL4O94818 638 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 HMGA1P17096 107 aaKnown RBP11.37□□□□□ -0.59
LINC00239-201ENST00000556973 CEBPBP17676 345 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 ANXA13P27216 316 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 GABRR2P28476 465 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 CDC25CP30307 473 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 GPR15P49685 360 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 HTR4Q13639 388 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 CCDC142Q17RM4 750 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 PARM1Q6UWI2 310 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 GAREM2Q75VX8 874 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 SCN4BQ8IWT1 228 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 SHKBP1Q8TBC3 707 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 RSAD2Q8WXG1 361 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 TRMT2BQ96GJ1 504 aaKnown RBP11.37□□□□□ -0.59
LINC00239-201ENST00000556973 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 MYRFLQ96LU7 910 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 ATXN3LQ9H3M9 355 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 ZNF334Q9HCZ1 680 aaPredicted RBP11.37□□□□□ -0.59
LINC00239-201ENST00000556973 CISHQ9NSE2 258 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 EHD2Q9NZN4 543 aa11.37□□□□□ -0.59
LINC00239-201ENST00000556973 UXTQ9UBK9 157 aaPredicted RBP11.37□□□□□ -0.59
LINC00239-201ENST00000556973 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 CLDN5O00501 218 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ECI2O75521 394 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 F11P03951 625 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 GJA1P17302 382 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 CD58P19256 250 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 PTMSP20962 102 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
LINC00239-201ENST00000556973 SIGLEC14Q08ET2 396 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 TEAD2Q15562 447 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ARHGAP15Q53QZ3 475 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 SDHAF4Q5VUM1 108 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 POTEHQ6S545 545 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 PAQR9Q6ZVX9 377 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 IRF2BP1Q8IU81 584 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ENOX1Q8TC92 643 aaKnown RBP11.36□□□□□ -0.59
LINC00239-201ENST00000556973 WHAMMQ8TF30 809 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 FGF14Q92915 247 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ELSPBP1Q96BH3 223 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 CYFIP2Q96F07 1278 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 CNOT6LQ96LI5 555 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms