RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 DPYDQ12882 1025 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 DUSP4Q13115 394 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 ANO6Q4KMQ2 910 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 SV2BQ7L1I2 683 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 TRIML1Q8N9V2 468 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 CRELD1Q96HD1 420 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 NAT10Q9H0A0 1025 aaKnown RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 TIMM13Q9Y5L4 95 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 KIF26AQ9ULI4 1882 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 DOPEY1Q5JWR5 2465 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 LNP1A1A4G5 178 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 M0QZQ0 153 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 TRDMT1O14717 391 aaKnown RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 DCLK1O15075 740 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 CPB1P15086 417 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 RPA1P27694 616 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 GPR17Q13304 367 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 CHCHD4Q8N4Q1 142 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 RAD54LQ92698 747 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 GSDMAQ96QA5 445 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 TARS2Q9BW92 718 aaKnown RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM9BQ9NQ34 198 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 MAN1B1Q9UKM7 699 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 SPTAN1Q13813 2472 aaKnown RBP13.72□□□□□ -0.21
PSEN1-219ENST00000556951 PLXNB3Q9ULL4 1909 aa13.72□□□□□ -0.21
PSEN1-219ENST00000556951 BCLAF3A2AJT9 711 aaKnown RBP13.71□□□□□ -0.21
PSEN1-219ENST00000556951 ARHGEF35A5YM69 484 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 BIN1O00499 593 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 CDX4O14627 284 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-219ENST00000556951 SOAT2O75908 522 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 MUTP22033 750 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 EPHB3P54753 998 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 KCNC4Q03721 635 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 MORC3Q14149 939 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 GPR158Q5T848 1215 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 DAW1Q8N136 415 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 CAMKK1Q8N5S9 505 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 BPIFB1Q8TDL5 484 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 PSMG2Q969U7 264 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 SLC46A2Q9BY10 475 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 RMND1Q9NWS8 449 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 KIAA1024Q9UPX6 916 aa13.71□□□□□ -0.21
PSEN1-219ENST00000556951 NUP205Q92621 2012 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 DPYSL4O14531 572 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 EGFP01133 1207 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 MCF2P10911 925 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 GABRR2P28476 465 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 NPTX2P47972 431 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 ZNF165P49910 485 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 CUL4BQ13620 913 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 SEZ6Q53EL9 994 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 MLKLQ8NB16 471 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 LRRC15Q8TF66 581 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 KIFAP3Q92845 792 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 CCDC47Q96A33 483 aaKnown RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
PSEN1-219ENST00000556951 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 SMG9Q9H0W8 520 aaKnown RBP13.7□□□□□ -0.22
PSEN1-219ENST00000556951 BLZF1Q9H2G9 400 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms