RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 NOL4O94818 638 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 KRT18P05783 430 aaKnown RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 PNPLA4P41247 253 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 GPR15P49685 360 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 FOXC1Q12948 553 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 ZNF77Q15935 545 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 DDR2Q16832 855 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 PMS2CLQ68D20 193 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 LEO1Q8WVC0 666 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 EZH1Q92800 747 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 FIZ1Q96SL8 496 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 TMEM9BQ9NQ34 198 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 MYH11P35749 1972 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 LAMA1P25391 3075 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 KIF26AQ9ULI4 1882 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-221ENST00000556571 SCN1AP35498 2009 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 TBCAO75347 108 aaKnown RBP12.78□□□□□ -0.36
ACTN1-221ENST00000556571 IL18RAPO95256 599 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 CKMP06732 381 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 UBA7P41226 1012 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 POSTNQ15063 836 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 EML3Q32P44 896 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 SDHAF4Q5VUM1 108 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 ABCA7Q8IZY2 2146 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 FSIP1Q8NA03 581 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 ST6GALNAC4Q9H4F1 302 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 WASF3Q9UPY6 502 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 INVSQ9Y283 1065 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 ANKRD11Q6UB99 2663 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-221ENST00000556571 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
ACTN1-221ENST00000556571 CDX4O14627 284 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 HUS1O60921 280 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 TADA3O75528 432 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 TCF3P15923 654 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 CYP2F1P24903 491 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 MYL7Q01449 175 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 USP4Q13107 963 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 MCM6Q14566 821 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 ZC2HC1CQ53FD0 456 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 RASSF3Q86WH2 238 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 STKLD1Q8NE28 680 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 CNOT6LQ96LI5 555 aaKnown RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 ADAM33Q9BZ11 813 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
ACTN1-221ENST00000556571 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
ACTN1-221ENST00000556571 TISP43B9A030 160 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 SEC24BO95487 1268 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 NFATC1O95644 943 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 HDCP19113 662 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 SPINK2P20155 84 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 PDE6CP51160 858 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 IRX4P78413 519 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 KCNB1Q14721 858 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 C2orf27AQ580R0 203 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-221ENST00000556571 SPATA18Q8TC71 538 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 LRRC15Q8TF66 581 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 CACTINQ8WUQ7 758 aaKnown RBP12.76□□□□□ -0.37
ACTN1-221ENST00000556571 POMGNT1Q8WZA1 660 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 RAD54LQ92698 747 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 FUBP3Q96I24 572 aaKnown RBP eCLIP12.76□□□□□ -0.37
ACTN1-221ENST00000556571 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-221ENST00000556571 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-221ENST00000556571 GTF3C4Q9UKN8 822 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
ACTN1-221ENST00000556571 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms