RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 K7ENM7 598 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 GOLIM4O00461 696 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 TGM5O43548 720 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 GAS7O60861 476 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 TAF5LO75529 589 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 NTSR2O95665 410 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 MT-CO1P00395 513 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 CAPN3P20807 821 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 CASTP20810 708 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 MAPK9P45984 424 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 ADAM15Q13444 863 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 SF3B3Q15393 1217 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 PDCD2Q16342 344 aaPredicted RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 DGKDQ16760 1214 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 SLC10A5Q5PT55 438 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 INTS11Q5TA45 600 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 PRAMEF9Q5VWM5 478 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 KLHDC10Q6PID8 442 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 BLOC1S2Q6QNY1 142 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 Q6ZSN1 163 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 RUFY3Q7L099 469 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 PALM2Q8IXS6 379 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 GPR135Q8IZ08 494 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 EFHBQ8N7U6 833 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 OR2W6PQ8NHA6 318 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 CCT6BQ92526 530 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 NELL1Q92832 810 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 NKD2Q969F2 451 aaPredicted RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 HSPBAP1Q96EW2 488 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 PAWRQ96IZ0 340 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 FAM227BQ96M60 508 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 TUBGCP5Q96RT8 1024 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 C12orf65Q9H3J6 166 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 RSAD1Q9HA92 442 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 TOMM22Q9NS69 142 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 THG1LQ9NWX6 298 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 KCMF1Q9P0J7 381 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 SAE1Q9UBE0 346 aaPredicted RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 FAM184BQ9ULE4 1060 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 ISY1Q9ULR0 285 aaKnown RBP5.77□□□□□ -1.49
SRP54-211ENST00000556445 DNM3Q9UQ16 869 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 ATP6V1DQ9Y5K8 247 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 LRP5O75197 1615 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 LY75O60449 1722 aa5.77□□□□□ -1.49
SRP54-211ENST00000556445 ITIH6Q6UXX5 1313 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SBF2Q86WG5 1849 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 MYH7P12883 1935 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SCN7AQ01118 1682 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 PMS2P1A4D2B8 440 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 MUSKO15146 869 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 MTA2O94776 668 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 VCAM1P19320 739 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 PDCP20941 246 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 COMTP21964 271 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 HSPA1LP34931 641 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 GRK6P43250 576 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 KRT85P78386 507 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SMAD3P84022 425 aaKnown RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 APBA1Q02410 837 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 PTH1RQ03431 593 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 ODF1Q14990 250 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 IQSEC1Q6DN90 963 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 BMP8AQ7Z5Y6 402 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SPRED1Q7Z699 444 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 ANKRD18AQ8IVF6 992 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 CHCHD4Q8N4Q1 142 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 VGLL2Q8N8G2 317 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SMC1BQ8NDV3 1235 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 GOLGA1Q92805 767 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 TNPO1Q92973 898 aaKnown RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 JAKMIP1Q96N16 626 aaKnown RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 OR14A2Q96R54 314 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 CRB3Q9BUF7 120 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 UPF3BQ9BZI7 483 aaKnown RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 PITHD1Q9GZP4 211 aaPredicted RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 SEMA4AQ9H3S1 761 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 AGO3Q9H9G7 860 aaKnown RBP5.76□□□□□ -1.49
SRP54-211ENST00000556445 NMRK2Q9NPI5 230 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 SMYD2Q9NRG4 433 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 GJD2Q9UKL4 321 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 DENND2AQ9ULE3 1009 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 KIF3AQ9Y496 699 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 TESMINQ9Y4I5 508 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 ARAP2Q8WZ64 1704 aa5.76□□□□□ -1.49
SRP54-211ENST00000556445 WDR33Q9C0J8 1336 aaKnown RBP5.75□□□□□ -1.49
SRP54-211ENST00000556445 RIC1Q4ADV7 1423 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 DDX60Q8IY21 1712 aaKnown RBP5.75□□□□□ -1.49
SRP54-211ENST00000556445 TTC36A6NLP5 189 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 A6NNZ2 444 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 GNAT2P19087 354 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 FGFR2P21802 821 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 RPS6KB1P23443 525 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 RFC4P35249 363 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 RPS19P39019 145 aaKnown RBP5.75□□□□□ -1.49
SRP54-211ENST00000556445 TSPAN7P41732 249 aa5.75□□□□□ -1.49
SRP54-211ENST00000556445 CLK1P49759 484 aaKnown RBP5.75□□□□□ -1.49
SRP54-211ENST00000556445 BCAR1P56945 870 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms