RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TSPY1Q01534 308 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 WSCD1Q658N2 575 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 LMBRD2Q68DH5 695 aaPredicted RBP15.03■□□□□ -0
ACTN1-219ENST00000556432 C19orf48Q6RUI8 117 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 KCNK18Q7Z418 384 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 LRRTM3Q86VH5 581 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 TMEFF1Q8IYR6 380 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 IGSF22Q8N9C0 903 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 RLN3Q8WXF3 142 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 MSTO1Q9BUK6 570 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 GTPBP2Q9BX10 602 aaKnown RBP15.03■□□□□ -0
ACTN1-219ENST00000556432 FOXP1Q9H334 677 aaPredicted RBP15.03■□□□□ -0
ACTN1-219ENST00000556432 UXTQ9UBK9 157 aaPredicted RBP15.03■□□□□ -0
ACTN1-219ENST00000556432 ITPR1Q14643 2758 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 WDFY3Q8IZQ1 3526 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 TAF6P49848 677 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 ZNF77Q15935 545 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 EML3Q32P44 896 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 RASSF3Q86WH2 238 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 SYT12Q8IV01 421 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 CD302Q8IX05 232 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 EFCAB13Q8IY85 973 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 C4orf32Q8N8J7 132 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 CYP2S1Q96SQ9 504 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 MMP17Q9ULZ9 603 aa15.02■□□□□ -0
ACTN1-219ENST00000556432 GON4LQ3T8J9 2241 aa15.02□□□□□ -0.01
ACTN1-219ENST00000556432 ANK1P16157 1881 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 GCN1Q92616 2671 aaKnown RBP15.01□□□□□ -0.01
ACTN1-219ENST00000556432 H0Y626 953 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 PIRO00625 290 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 TNFRSF10BO14763 440 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 TRIM16O95361 564 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 NFATC1O95644 943 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 PTGER3P43115 390 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 USP4Q13107 963 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 KCNB1Q14721 858 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 CRY1Q16526 586 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 LYSMD4Q5XG99 296 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 CHCHD4Q8N4Q1 142 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 SH3RF2Q8TEC5 729 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 WHAMMQ8TF30 809 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 CDK5RAP3Q96JB5 506 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 SLC22A12Q96S37 553 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 PLIN2Q99541 437 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 TMEM206Q9H813 350 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 FSCN3Q9NQT6 498 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 LARSQ9P2J5 1176 aaKnown RBP15.01□□□□□ -0.01
ACTN1-219ENST00000556432 MYO16Q9Y6X6 1858 aa15.01□□□□□ -0.01
ACTN1-219ENST00000556432 MYH11P35749 1972 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 DENND4CQ5VZ89 1909 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 ANO9A1A5B4 782 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 PCNX2A6NKB5 2137 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 K7ENM7 598 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 TADA3O75528 432 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 KLF8O95600 359 aaPredicted RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 DPP6P42658 865 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 RPL10AP62906 217 aaKnown RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 GFPT1Q06210 699 aaPredicted RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 NFE2Q16621 373 aaPredicted RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 DDR2Q16832 855 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 PIP4P1Q86T03 277 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 PROSER1Q86XN7 944 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 ALLCQ8N6M5 410 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 ARL14EPQ8N8R7 260 aaPredicted RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 HMGB4Q8WW32 186 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 TMEM74BQ9NUR3 256 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 TMLHEQ9NVH6 421 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 KIAA1549LQ6ZVL6 1849 aa15□□□□□ -0.01
ACTN1-219ENST00000556432 SETXQ7Z333 2677 aaKnown RBP15□□□□□ -0.01
ACTN1-219ENST00000556432 FREM2Q5SZK8 3169 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 K7EQS6 105 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 FAM189A1O60320 539 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 OPHN1O60890 802 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 P2RY2P41231 377 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 NCKAP1LP55160 1127 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 ANAPC15P60006 121 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 SEMA3BQ13214 749 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 BYSLQ13895 437 aaKnown RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 SV2CQ496J9 727 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 ZC2HC1CQ53FD0 456 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 DTHD1Q6ZMT9 781 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 PDZD3Q86UT5 571 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 FRMD1Q8N878 549 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 FSIP1Q8NA03 581 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 TXNDC5Q8NBS9 432 aaKnown RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 FNBP1Q96RU3 617 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 LINC00597Q9H2U6 94 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 POLMQ9NP87 494 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 DPP3Q9NY33 737 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 MBD1Q9UIS9 605 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 CPSF3Q9UKF6 684 aaKnown RBP14.99□□□□□ -0.01
ACTN1-219ENST00000556432 DERAQ9Y315 318 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 GPSM3Q9Y4H4 160 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 OBSL1O75147 1896 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 SCN1AP35498 2009 aa14.99□□□□□ -0.01
ACTN1-219ENST00000556432 A0A0B4J269 797 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 C2orf78A6NCI8 922 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms