RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 DNAJB7Q7Z6W7 309 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 SPATA2LQ8IUW3 424 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 SHKBP1Q8TBC3 707 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 TAF4BQ92750 862 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 NRG2O14511 850 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 NARSO43776 548 aaKnown RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 P4HA1P13674 534 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 BMP6P22004 513 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 LMO2P25791 158 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 GTF2H1P32780 548 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 MAGEA11P43364 429 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 GCLMP48507 274 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 CDR1P51861 262 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 RPL10AP62906 217 aaKnown RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 PPP3CAQ08209 521 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 MORC3Q14149 939 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 TMEM8AQ9HCN3 771 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-205ENST00000556310 CRTAC1Q9NQ79 661 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 NME7Q9Y5B8 376 aa12.32□□□□□ -0.44
SLIRP-205ENST00000556310 ZNF638Q14966 1978 aaKnown RBP12.31□□□□□ -0.44
SLIRP-205ENST00000556310 A0A1W2PRU2 124 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 STX10O60499 249 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 ATP2C2O75185 946 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 ECI2O75521 394 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GJA1P17302 382 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 COL9A1P20849 921 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 FCARP24071 287 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 CYP2F1P24903 491 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GABRR2P28476 465 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 CDC25CP30307 473 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 MXI1P50539 228 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
SLIRP-205ENST00000556310 TEAD2Q15562 447 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 TAF12Q16514 161 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 VSTM1Q6UX27 236 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
SLIRP-205ENST00000556310 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 KXD1Q9BQD3 176 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 SLC2A4RGQ9NR83 387 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 HCN4Q9Y3Q4 1203 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 KIF26AQ9ULI4 1882 aaPredicted RBP12.31□□□□□ -0.44
SLIRP-205ENST00000556310 COL4A2P08572 1712 aa12.31□□□□□ -0.44
SLIRP-205ENST00000556310 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 A8MXQ7 604 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 BIN1O00499 593 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CSH1P0DML2 217 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CSH2P0DML3 217 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 HMGA1P17096 107 aaKnown RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 ASPAP45381 313 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 RAP1GAPP47736 663 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 GPR15P49685 360 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 FAM78AQ5JUQ0 283 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 KRT39Q6A163 491 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 KLHL10Q6JEL2 608 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 TTI2Q6NXR4 508 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms