RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NLRP5P59047 1200 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 PSMC5P62195 406 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 LETM2Q2VYF4 491 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 LONRF3Q496Y0 759 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 MTERF2Q49AM1 385 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 CWF19L1Q69YN2 538 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 GALNT17Q6IS24 598 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 SRGAP1Q7Z6B7 1085 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 RNF168Q8IYW5 571 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 SCLT1Q96NL6 688 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 RTP3Q9BQQ7 232 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 JPH2Q9BR39 696 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 SH2D3AQ9BRG2 576 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 SLC26A6Q9BXS9 759 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 DHX33Q9H6R0 707 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 SFXN1Q9H9B4 322 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 RXFP1Q9HBX9 757 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 AGPAT5Q9NUQ2 364 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 IGSF9Q9P2J2 1179 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 WNT16Q9UBV4 365 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 KCNH3Q9ULD8 1083 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 NAP1L2Q9ULW6 460 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 CTNND2Q9UQB3 1225 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 PIN4Q9Y237 131 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 FAN1Q9Y2M0 1017 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 DCHS1Q96JQ0 3298 aa9.98□□□□□ -0.81
GTF2A1-204ENST00000556268 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 EP300Q09472 2414 aaPredicted RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 NRP1O14786 923 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 RGS13O14921 159 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 ASAP2O43150 1006 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 N4BP1O75113 896 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 CDC45O75419 566 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 UBOX5O94941 541 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 ESR1P03372 595 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 NCLP19338 710 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 KLRC2P26717 231 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 GBP1P32455 592 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 MCM4P33991 863 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 QARSP47897 775 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 CCT2P78371 535 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 PPP2R5CQ13362 524 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 BLOC1S2Q6QNY1 142 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 TAS1R1Q7RTX1 841 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 CATSPER4Q7RTX7 472 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 TMPRSS7Q7RTY8 843 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 FRMD5Q7Z6J6 570 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 SKAP1Q86WV1 359 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 SLITRK4Q8IW52 837 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 CCDC105Q8IYK2 499 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 GPR65Q8IYL9 337 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 HDAC7Q8WUI4 952 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 PRPF31Q8WWY3 499 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 NKD1Q969G9 470 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 RPS6KC1Q96S38 1066 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 GPR62Q9BZJ7 368 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 MINDY3Q9H8M7 445 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 WDR6Q9NNW5 1121 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 KCNMB3Q9NPA1 279 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 CHST7Q9NS84 486 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 DUSP12Q9UNI6 340 aa9.97□□□□□ -0.81
GTF2A1-204ENST00000556268 TDP2O95551 362 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 SOD2P04179 222 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 SRFP11831 508 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 TPP2P29144 1249 aaPredicted RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 NPEPPSP55786 919 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 RNASELQ05823 741 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 POU5F1BQ06416 359 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 DSC1Q08554 894 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 PCBP1Q15365 356 aaKnown RBP eCLIP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 LILRA6Q6PI73 481 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 C4orf19Q8IY42 314 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 COLGALT2Q8IYK4 626 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 BLIDQ8IZY5 108 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 SLC44A3Q8N4M1 653 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 CNNM3Q8NE01 707 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 URGCPQ8TCY9 931 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 FAM168AQ92567 244 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 RNF34Q969K3 372 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 FAM20AQ96MK3 541 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 TRIT1Q9H3H1 467 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 MFSD1Q9H3U5 465 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 RSAD1Q9HA92 442 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 MRPL17Q9NRX2 175 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 MIOSQ9NXC5 875 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 SSX2IPQ9Y2D8 614 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms