RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PSMD10O75832 226 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ERLIN2O94905 339 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 CSRP1P21291 193 aaKnown RBP7.59□□□□□ -1.19
ATXN3-236ENST00000556220 MPLP40238 635 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 PREPP48147 710 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SPIRE1Q08AE8 756 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ELAVL2Q12926 359 aaKnown RBP7.59□□□□□ -1.19
ATXN3-236ENST00000556220 AAMPQ13685 434 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 LRCH2Q5VUJ6 765 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TCEAL6Q6IPX3 200 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 FDX2Q6P4F2 183 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 B3GNT9Q6UX72 402 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 BEND4Q6ZU67 534 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 MIER3Q7Z3K6 550 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SMC5Q8IY18 1101 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 EXOC8Q8IYI6 725 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 HACE1Q8IYU2 909 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SYNPOQ8N3V7 929 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 RNF149Q8NC42 400 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SNX29Q8TEQ0 813 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 HASPINQ8TF76 798 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TCEAL3Q969E4 200 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 GJA10Q969M2 543 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 CPB2Q96IY4 423 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ZSWIM3Q96MP5 696 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 HHIPQ96QV1 700 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 EDEM2Q9BV94 578 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 LRRC2Q9BYS8 371 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ZMYND12Q9H0C1 365 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TRPV4Q9HBA0 871 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ANKFY1Q9P2R3 1169 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 CACNG4Q9UBN1 327 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 MSRB2Q9Y3D2 182 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 NEUROG3Q9Y4Z2 214 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 SPAG17Q6Q759 2223 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 GON4LQ3T8J9 2241 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 ESYT2A0FGR8 921 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 WDR27A2RRH5 827 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 MYBPHLA2RUH7 354 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 HEPACAM2A8MVW5 462 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 EXTL3O43909 919 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PHACTR2O75167 634 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 AKAP3O75969 853 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CCDC192P0DO97 292 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 VIPR2P41587 438 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CCR2P41597 374 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 SOX9P48436 509 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 USP11P51784 963 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 KPNA1P52294 538 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 NPEPPSP55786 919 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PTENP60484 403 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PSMC5P62195 406 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 NUCB1Q02818 461 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 TUSC3Q13454 348 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PFKFB3Q16875 520 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PLK5Q496M5 336 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PLA2G4FQ68DD2 849 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 FERMT3Q86UX7 667 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 REXO1Q8N1G1 1221 aaKnown RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CSGALNACT1Q8TDX6 532 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 KCNF1Q9H3M0 494 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 NXF3Q9H4D5 531 aaKnown RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 SOX17Q9H6I2 414 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 DHX33Q9H6R0 707 aaKnown RBP7.58□□□□□ -1.2
ATXN3-236ENST00000556220 C6orf50Q9HD87 102 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 MTRRQ9UBK8 725 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 BACE2Q9Y5Z0 518 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 CDY1Q9Y6F8 540 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 GREB1Q4ZG55 1949 aa7.58□□□□□ -1.2
ATXN3-236ENST00000556220 APC2O95996 2303 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 PRR19A6NJB7 356 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 EREGO14944 169 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CHADO15335 359 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 MOSPD3O75425 235 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CAVIN2O95810 425 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 LRG1P02750 347 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CAPNS1P04632 268 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ARF4P18085 180 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CHMLP26374 656 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 GNA11P29992 359 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ELF1P32519 619 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 PXNP49023 591 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 POU5F1BQ06416 359 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 Q4G0T1 1027 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CYP4A22Q5TCH4 519 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 APOA5Q6Q788 366 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 PDZD4Q76G19 769 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms