RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	TRIM67	Q6ZTA4	783 aa		12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	ENOSF1	Q7L5Y1	443 aa		12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	ZBED8	Q8IZ13	594 aa		12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	FAM167A	Q96KS9	214 aa		12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	ECT2	Q9H8V3	914 aa		12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	A1CF	Q9NQ94	594 aa	Known RBP	12.88	□□□□□ -0.35
TMPO-212	ENST00000556029	PRKCB	P05771	671 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	MYBL1	P10243	752 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	PSMA2	P25787	234 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RANBP1	P43487	201 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	GPC3	P51654	580 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	VGLL4	Q14135	290 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	TAF1C	Q15572	869 aa	Predicted RBP	12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CYP1B1	Q16678	543 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	IZUMO3	Q5VZ72	239 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	TMEM109	Q9BVC6	243 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	FSCN2	O14926	492 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	HSPA4L	O95757	839 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	SETSIP	P0DME0	302 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	ARL4A	P40617	200 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	HSD17B4	P51659	736 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CLCN3	P51790	818 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	POU5F1B	Q06416	359 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CYP24A1	Q07973	514 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	LY6K	Q17RY6	165 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	ANKMY2	Q8IV38	441 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	WDR75	Q8IWA0	830 aa	Known RBP	12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	OR6B3	Q8NGW1	331 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RNF217	Q8TC41	542 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	HELQ	Q8TDG4	1101 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CD101	Q93033	1021 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CCDC90B	Q9GZT6	254 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	ANKEF1	Q9NU02	776 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	ADAMTSL1	Q8N6G6	1762 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RNASEL	Q05823	741 aa	Known RBP	12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	XRCC4	Q13426	336 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	TCEAL1	Q15170	157 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	WDR72	Q3MJ13	1102 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	NIPA1	Q7RTP0	329 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	SPATA21	Q7Z572	469 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RNF135	Q8IUD6	432 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	CRLF3	Q8IUI8	442 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RHOT1	Q8IXI2	618 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	MCOLN2	Q8IZK6	566 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	C4orf33	Q8N1A6	199 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	TMEM161B	Q8NDZ6	487 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	TMC2	Q8TDI7	906 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	DEPDC1B	Q8WUY9	529 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	OPTN	Q96CV9	577 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	MRPL4	Q9BYD3	311 aa	Known RBP	12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	NOD2	Q9HC29	1040 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	ANGPTL3	Q9Y5C1	460 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	UBIAD1	Q9Y5Z9	338 aa		12.87	□□□□□ -0.35
TMPO-212	ENST00000556029	RNF103-CHMP3	A0A140T963	221 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CFAP73	A6NFT4	308 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	IRF6	O14896	467 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	UBOX5	O94941	541 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	DSG3	P32926	999 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	NCKAP1L	P55160	1127 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	ELF3	P78545	371 aa	Predicted RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	DAB2	P98082	770 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CHADL	Q6NUI6	762 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	EP400NL	Q6ZTU2	488 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PIGW	Q7Z7B1	504 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	MAP4K3	Q8IVH8	894 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	TRAPPC12	Q8WVT3	735 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CLMN	Q96JQ2	1002 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PWWP2A	Q96N64	755 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	DCLK3	Q9C098	648 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	GPRC5D	Q9NZD1	345 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PCDHB2	Q9Y5E7	798 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	FOXO6	A8MYZ6	492 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	DHX15	O43143	795 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	LDHA	P00338	332 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	ADSS	P30520	456 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	ZNF157	P51786	506 aa	Predicted RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	DAB2IP	Q5VWQ8	1189 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	TWF2	Q6IBS0	349 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PDZD4	Q76G19	769 aa	Predicted RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	ERO1B	Q86YB8	467 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	ADAM7	Q9H2U9	754 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	LRRC4	Q9HBW1	653 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CYP26B1	Q9NR63	512 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	RIPK3	Q9Y572	518 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	E2F8	A0AVK6	867 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	SYNDIG1L	A6NDD5	238 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	EEF1D	P29692	281 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	GNA15	P30679	374 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PHKA2	P46019	1235 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PDIA2	Q13087	525 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	B3GNT9	Q6UX72	402 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CXorf56	Q9H5V9	222 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	SCIN	Q9Y6U3	715 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	NVL	O15381	856 aa	Known RBP	12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	SNX3	O60493	162 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	KRT37	O76014	449 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	HAUS5	O94927	633 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	PRPSAP1	Q14558	356 aa		12.86	□□□□□ -0.35
TMPO-212	ENST00000556029	CYTH1	Q15438	398 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms