RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SPDEFO95238 335 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 HLA-DOAP06340 250 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 TSHRP16473 764 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 SLC6A4P31645 630 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 ARFIP2P53365 341 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 RPS16P62249 146 aaKnown RBP6.46□□□□□ -1.38
VRK1-205ENST00000555402 MXRA7P84157 204 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 RAB32Q13637 225 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 BMT2Q1RMZ1 405 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 DGKKQ5KSL6 1271 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 KLHDC7AQ5VTJ3 777 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 HIBCHQ6NVY1 386 aaPredicted RBP6.46□□□□□ -1.38
VRK1-205ENST00000555402 EFCAB12Q6NXP0 572 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 ERAP2Q6P179 960 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 DRICH1Q6PGQ1 229 aaPredicted RBP6.46□□□□□ -1.38
VRK1-205ENST00000555402 ZNF365Q70YC5 407 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 RNF169Q8NCN4 708 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 NMD3Q96D46 503 aaKnown RBP6.46□□□□□ -1.38
VRK1-205ENST00000555402 PHACTR3Q96KR7 559 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 CRB3Q9BUF7 120 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 RLIMQ9NVW2 624 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 POGKQ9P215 609 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 COL20A1Q9P218 1284 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 CDC23Q9UJX2 597 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 CDHR4A6H8M9 788 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 THP07101 528 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 PPM1AP35813 382 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 ABCG1P45844 678 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 LMBRD2Q68DH5 695 aaPredicted RBP6.45□□□□□ -1.38
VRK1-205ENST00000555402 PDSS2Q86YH6 399 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 FITM2Q8N6M3 262 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 C9orf106Q8NAJ2 232 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 TBC1D15Q8TC07 691 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 BRI3BPQ8WY22 251 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 MSLNLQ96KJ4 702 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 BRIP1Q9BX63 1249 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 SLC29A3Q9BZD2 475 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 WDR12Q9GZL7 423 aaKnown RBP6.45□□□□□ -1.38
VRK1-205ENST00000555402 MAGED2Q9UNF1 606 aaPredicted RBP6.45□□□□□ -1.38
VRK1-205ENST00000555402 MAP3K2Q9Y2U5 619 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 PCDHGB2Q9Y5G2 931 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 MAST3O60307 1309 aa6.45□□□□□ -1.38
VRK1-205ENST00000555402 NBNO60934 754 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 FGF18O76093 207 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 AGFG2O95081 481 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 UNC5CO95185 931 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ANXA1P04083 346 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SPATA31D3P0C874 917 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ITGAMP11215 1152 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ZNF135P52742 658 aaPredicted RBP6.44□□□□□ -1.38
VRK1-205ENST00000555402 TNFAIP2Q03169 654 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 CTBP1Q13363 440 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 PMS2P11Q13670 270 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 KRT72Q14CN4 511 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ARL13BQ3SXY8 428 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SPATA31D4Q6ZUB0 917 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SLC44A3Q8N4M1 653 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SLC15A4Q8N697 577 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ANKRD42Q8N9B4 389 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ATP11CQ8NB49 1132 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 OR10H5Q8NGA6 315 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 DDX17Q92841 729 aaKnown RBP6.44□□□□□ -1.38
VRK1-205ENST00000555402 ZC3H10Q96K80 434 aaKnown RBP6.44□□□□□ -1.38
VRK1-205ENST00000555402 IMPG2Q9BZV3 1241 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 ZNF518BQ9C0D4 1074 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SERHLQ9NQF3 203 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 SEMA4GQ9NTN9 838 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 RNF181Q9P0P0 153 aa6.44□□□□□ -1.38
VRK1-205ENST00000555402 TRIM43BA6NCK2 446 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 M0QYG6 137 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 GRPP07492 148 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 HARSP12081 509 aaKnown RBP6.43□□□□□ -1.38
VRK1-205ENST00000555402 SLC6A2P23975 617 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 TECP42680 631 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 RESTQ13127 1097 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 GRM1Q13255 1194 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 AMOTQ4VCS5 1084 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 INO80DQ53TQ3 878 aaPredicted RBP6.43□□□□□ -1.38
VRK1-205ENST00000555402 MED25Q71SY5 747 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 USP37Q86T82 979 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 SYTL1Q8IYJ3 562 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 TXLNBQ8N3L3 684 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 DNAJC5GQ8N7S2 189 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 RNF152Q8N8N0 203 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 MAML1Q92585 1016 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 TRIM43Q96BQ3 446 aaPredicted RBP6.43□□□□□ -1.38
VRK1-205ENST00000555402 IQCDQ96DY2 449 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 SNX22Q96L94 193 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 HERPUD2Q9BSE4 406 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 COLEC11Q9BWP8 271 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 STK31Q9BXU1 1019 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 DPH1Q9BZG8 443 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 SIK2Q9H0K1 926 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 SMURF2Q9HAU4 748 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 ITGB1BP2Q9UKP3 347 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 TMX2Q9Y320 296 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms