RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CEP295NLQ96MC4 621 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 PGLYRP2Q96PD5 576 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 IGFLR1Q9H665 355 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNE2-219ENST00000555323 ATG2AQ2TAZ0 1938 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CYP26A1O43174 497 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ZMYND10O75800 440 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 POU2F2P09086 479 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 KRT5P13647 590 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 SOX5P35711 763 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 LTBRP36941 435 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 STAT1P42224 750 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 PTK2Q05397 1052 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ORC1Q13415 861 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 STILQ15468 1287 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CCDC142Q17RM4 750 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 SPATA2LQ8IUW3 424 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-219ENST00000555323 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CMASQ8NFW8 434 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CYP4F11Q9HBI6 524 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 CSNK1G1Q9HCP0 422 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 AIPL1Q9NZN9 384 aa13.47□□□□□ -0.25
SYNE2-219ENST00000555323 O00370 1275 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 LINC01565O15544 149 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 GYPCP04921 128 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SPATA31D3P0C874 917 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 HOXB8P17481 243 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 BDNFP23560 247 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 CYP2F1P24903 491 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 MEA1Q16626 185 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SGO2Q562F6 1265 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 ANKRD52Q8NB46 1076 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SLC2A14Q8TDB8 520 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 DZANK1Q9NVP4 752 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 ABI2Q9NYB9 513 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-219ENST00000555323 CLEC1BQ9P126 229 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
SYNE2-219ENST00000555323 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 CLDN5O00501 218 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 PRRG1O14668 218 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 C8AP07357 584 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SRGAP2BP0DMP2 458 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 CCDC130P13994 396 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 CD19P15391 556 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 CYP11B1P15538 503 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 USP8P40818 1118 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 ZBED6P86452 979 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 CYP27A1Q02318 531 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-219ENST00000555323 MGAT5BQ3V5L5 792 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SYCE2Q6PIF2 218 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 IRF2BP2Q7Z5L9 587 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 FAM35AQ86V20 835 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SLC47A2Q86VL8 602 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SLC7A14Q8TBB6 771 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 DDX1Q92499 740 aaKnown RBP13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 MSLNLQ96KJ4 702 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 SPATA17Q96L03 361 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 C8orf48Q96LL4 319 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 DUSP16Q9BY84 665 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 S1PR5Q9H228 398 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 GRPEL1Q9HAV7 217 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
SYNE2-219ENST00000555323 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNE2-219ENST00000555323 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms