RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 EXOC4Q96A65 974 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 DHX58Q96C10 678 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 HPDLQ96IR7 371 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 PI4K2AQ9BTU6 479 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 AGPAT3Q9NRZ7 376 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 TDP1Q9NUW8 608 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 TMLHEQ9NVH6 421 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 EHD2Q9NZN4 543 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 NCDNQ9UBB6 729 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 CFAP45Q9UL16 551 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 CDH9Q9ULB4 789 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 KIAA1549LQ6ZVL6 1849 aa9.66□□□□□ -0.86
AC004828.1-201ENST00000555303 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 PTPRJQ12913 1337 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 PVALEFA0A1B0GWK0 134 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 POLR2DO15514 142 aaKnown RBP9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 STAU1O95793 577 aaKnown RBP9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 PFKLP17858 780 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 WARSP23381 471 aaKnown RBP9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 HOXA6P31267 233 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 CNR2P34972 360 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 HOXD13P35453 343 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 CXCL12P48061 93 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 ME1P48163 572 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 CCINQ13939 588 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 PSMD6Q15008 389 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 SOWAHAQ2M3V2 549 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 RESP18Q5W5W9 173 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 FAM171BQ6P995 826 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 MON1AQ86VX9 555 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 CBWD2Q8IUF1 395 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 XXYLT1Q8NBI6 393 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 OR5B17Q8NGF7 314 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 SPATA17Q96L03 361 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 LRRC3BQ96PB8 259 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 FNBP1Q96RU3 617 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 CGRRF1Q99675 332 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 SYT15Q9BQS2 421 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 SLC46A2Q9BY10 475 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 GTF3C4Q9UKN8 822 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 RAB23Q9ULC3 237 aa9.65□□□□□ -0.86
AC004828.1-201ENST00000555303 TRAV19A0A0A6YYK7 116 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TRIM66O15016 1216 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TGFB1I1O43294 461 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 LRP3O75074 770 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TACC1O75410 805 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 MYL1P05976 194 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TCF3P15923 654 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 ACAT1P24752 427 aaKnown RBP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 CYP2F1P24903 491 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 AP3M2P53677 418 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 CYP24A1Q07973 514 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 RUNX3Q13761 415 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 PDGFRLQ15198 375 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 DDR2Q16832 855 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 LAIR1Q6GTX8 287 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 CC2D1AQ6P1N0 951 aaPredicted RBP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TXNDC11Q6PKC3 985 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TSSK4Q6SA08 328 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 OSTM1Q86WC4 334 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 KIAA2013Q8IYS2 634 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 KIAA1958Q8N8K9 716 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 MAB21L3Q8N8X9 362 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 TMEM174Q8WUU8 243 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 SCFD1Q8WVM8 642 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 KBTBD7Q8WVZ9 684 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 USP13Q92995 863 aaPredicted RBP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 ZFYVE19Q96K21 471 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 FAM83CQ9BQN1 747 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 MAGED2Q9UNF1 606 aaPredicted RBP9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 MYO16Q9Y6X6 1858 aa9.64□□□□□ -0.87
AC004828.1-201ENST00000555303 CCDC163A0A0D9SF12 145 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 PRR5-ARHGAP8B1AHC4 643 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 FOXD2O60548 495 aaPredicted RBP9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 ATG13O75143 517 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 TADA3O75528 432 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 CKMP06732 381 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 DLATP10515 647 aaKnown RBP9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 TNNI1P19237 187 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 ANXA13P27216 316 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 ATICP31939 592 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 SOX9P48436 509 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 PPP3CCP48454 512 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 GPR15P49685 360 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 CYP2J2P51589 502 aa9.63□□□□□ -0.87
AC004828.1-201ENST00000555303 TNNC1P63316 161 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms