RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TSG101Q99816 390 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 DUSP9Q99956 384 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ATXN3LQ9H3M9 355 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 VRTNQ9H8Y1 702 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 DUSP12Q9UNI6 340 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 DOCK8Q8NF50 2099 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 A8MXQ7 604 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CLDN5O00501 218 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 HMGA1P17096 107 aaKnown RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GABRR2P28476 465 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 STX17P56962 302 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TAF12Q16514 161 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ITIH5Q86UX2 942 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 NELFBQ8WX92 580 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MYLPFQ96A32 169 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 PCED1BQ96HM7 432 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 IPO9Q96P70 1041 aaKnown RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MAGED2Q9UNF1 606 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC6B-205ENST00000555269 KRBA1A5PL33 1030 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 PSMA7O14818 248 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FCARP24071 287 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GRIK1P39086 918 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CACNA2D1P54289 1103 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CYP4F8P98187 520 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ORC1Q13415 861 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 STIM1Q13586 685 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GRM2Q14416 872 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 VEPH1Q14D04 833 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TTI2Q6NXR4 508 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MTSS1LQ765P7 747 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TMEM150AQ86TG1 271 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SIX5Q8N196 739 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FBXL6Q8N531 539 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 LEMD2Q8NC56 503 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ZSCAN18Q8TBC5 510 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TATDN2Q93075 761 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 RSPRY1Q96DX4 576 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MKNK1Q9BUB5 465 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 B3GNT5Q9BYG0 378 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SLITRK6Q9H5Y7 841 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ABCB6Q9NP58 842 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SLC38A8A6NNN8 435 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 PI15O43692 258 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ECI2O75521 394 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 F11P03951 625 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SRFP11831 508 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 NPR3P17342 541 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GTF2H1P32780 548 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ASPAP45381 313 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 NDST1P52848 882 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 LRRC63Q05C16 580 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ENPEPQ07075 957 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CFAP221Q4G0U5 840 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CBWD6Q4V339 395 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CBWD3Q5JTY5 395 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CBWD5Q5RIA9 395 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 GPR158Q5T848 1215 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TCERG1LQ5VWI1 586 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 KRT39Q6A163 491 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 C4orf50Q6ZRC1 276 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ACOT1Q86TX2 421 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TAF4BQ92750 862 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 LRRC3BQ96PB8 259 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SLC46A2Q9BY10 475 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ZNF518BQ9C0D4 1074 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ZFP14Q9HCL3 533 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 WNT16Q9UBV4 365 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 HMGXB4Q9UGU5 601 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 TSC2P49815 1807 aa13.24□□□□□ -0.29
TRAPPC6B-205ENST00000555269 WDFY4Q6ZS81 3184 aa13.23□□□□□ -0.29
TRAPPC6B-205ENST00000555269 NCANO14594 1321 aa13.23□□□□□ -0.29
TRAPPC6B-205ENST00000555269 STK25O00506 426 aa13.23□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
TRAPPC6B-205ENST00000555269 AVPR2P30518 371 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms