RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 JOSD2Q8TAC2 188 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 CTNNAL1Q9UBT7 734 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 DNPEPQ9ULA0 475 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 A0A0B4J269 797 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 TCF4P15884 667 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MSH2P43246 934 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SULT1E1P49888 294 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MFSD10Q14728 455 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SLMAPQ14BN4 828 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MCUQ8NE86 351 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 GPR152Q8TDT2 470 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 TBC1D31Q96DN5 1066 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 TMEM176AQ96HP8 235 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FAM81BQ96LP2 452 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ARHGAP28Q9P2N2 729 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 CYB561D2O14569 222 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 HNRNPH3P31942 346 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 CLUL1Q15846 466 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 CCDC6Q16204 474 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATP6V1G3Q96LB4 118 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 R3HDM2Q9Y2K5 976 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 NEU2Q9Y3R4 380 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 NT5C1B-RDH14C9J2C7 533 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ASAP2O43150 1006 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SCNN1GP51170 649 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 WDR49Q8IV35 697 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 TFAP2BQ92481 460 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SMC6Q96SB8 1091 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 DFFAO00273 331 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 PRKCIP41743 596 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 NFIL3Q16649 462 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 EML3Q32P44 896 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 CRYGNQ8WXF5 182 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 UNKQ9C0B0 810 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 M0QYT0 321 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPEF2O14830 753 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 PJA2O43164 708 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 SHBGP04278 402 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 CCDC142Q17RM4 750 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZNF484Q5JVG2 852 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 CENPUQ71F23 418 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 TSNARE1Q96NA8 513 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 C4AP0C0L4 1744 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 MICAL2O94851 1124 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 KRT7P08729 469 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 GZMAP12544 262 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 HSPA6P17066 643 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 IFI35P80217 286 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 RYBPQ8N488 228 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 SNF8Q96H20 258 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 DMAC2Q9NW81 257 aa12.81□□□□□ -0.36
ARHGEF40-206ENST00000555232 KCNK1O00180 336 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 USP12O75317 370 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 ENDOD1O94919 500 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 RGS2P41220 211 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 PTENP60484 403 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 PRELID2Q8N945 189 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 FIZ1Q96SL8 496 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 PCYT2Q99447 389 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 MARCOQ9UEW3 520 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 AP1G2O75843 785 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms