RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ANKRD54Q6NXT1 300 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 RRAGAQ7L523 313 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 OSTM1Q86WC4 334 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 SPATA2LQ8IUW3 424 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-218ENST00000555213 ARHGEF19Q8IW93 802 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 B3GALNT2Q8NCR0 500 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 SLC7A14Q8TBB6 771 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 SPPL2BQ8TCT7 592 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 SYN2Q92777 582 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-218ENST00000555213 ELMO3Q96BJ8 720 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 PGLYRP2Q96PD5 576 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 ABCB6Q9NP58 842 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 NLRC4Q9NPP4 1024 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 CISHQ9NSE2 258 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 ZDHHC7Q9NXF8 308 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 ABI2Q9NYB9 513 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-218ENST00000555213 AIPL1Q9NZN9 384 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 HSFX1Q9UBD0 423 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 APEX2Q9UBZ4 518 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 FAM50BQ9Y247 325 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 MYO7AQ13402 2215 aa11.61□□□□□ -0.55
SHMT2-218ENST00000555213 LAMA2P24043 3122 aaKnown RBP11.61□□□□□ -0.55
SHMT2-218ENST00000555213 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 SOWAHDA6NJG2 315 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 LRRC53A6NM62 1247 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 XYLBO75191 536 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 TBX10O75333 385 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ZMYND10O75800 440 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 LRG1P02750 347 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 PLEKP08567 350 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 PDGFRBP09619 1106 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 HNRNPA1P09651 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 SPATA31D3P0C874 917 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 HOXA9P31269 272 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 TUFMP49411 452 aaKnown RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 NDST1P52848 882 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 MFAP3P55082 362 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 CDH8P55286 799 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ITIH3Q06033 890 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 KCNC3Q14003 757 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ASTE1Q2TB18 679 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 CES5AQ6NT32 575 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 LILRA6Q6PI73 481 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 SPATA31D4Q6ZUB0 917 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 TCEAL8Q8IYN2 117 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ELMOD1Q8N336 334 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 KAT5Q92993 513 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 FUBP3Q96I24 572 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 KREMEN1Q96MU8 473 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 SEPT5Q99719 369 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ARID3AQ99856 593 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 STK33Q9BYT3 514 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-218ENST00000555213 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 CD207Q9UJ71 328 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 DNAJC12Q9UKB3 198 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 DAAM1Q9Y4D1 1078 aa11.6□□□□□ -0.55
SHMT2-218ENST00000555213 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CILPO75339 1184 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 PTPN1P18031 435 aaKnown RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 LMO2P25791 158 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 VEPH1Q14D04 833 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 MGAT5BQ3V5L5 792 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 MDH1BQ5I0G3 518 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 SMYD5Q6GMV2 418 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CYP26C1Q6V0L0 522 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 RNF19BQ6ZMZ0 732 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 TOGARAM2Q6ZUX3 1019 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 TMTC1Q8IUR5 882 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 REXO1L1PQ8IX06 675 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CCDC112Q8NEF3 446 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 CMASQ8NFW8 434 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 MYCBPAPQ8TBZ2 947 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 MYLPFQ96A32 169 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 RIPOR3Q96MK2 946 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 TMEM209Q96SK2 561 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 ELOVL4Q9GZR5 314 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 PIDD1Q9HB75 910 aa11.59□□□□□ -0.55
SHMT2-218ENST00000555213 UBE2TQ9NPD8 197 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-218ENST00000555213 SPTLC3Q9NUV7 552 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms