RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 EZH1Q92800 747 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-207ENST00000554927 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
TUBB3-207ENST00000554927 COL26A1Q96A83 441 aa14.28□□□□□ -0.12
TUBB3-207ENST00000554927 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-207ENST00000554927 WNT6Q9Y6F9 365 aa14.28□□□□□ -0.12
TUBB3-207ENST00000554927 SETXQ7Z333 2677 aaKnown RBP14.28□□□□□ -0.12
TUBB3-207ENST00000554927 ALDH1A2O94788 518 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 F11P03951 625 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 CFIP05156 583 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 HAPLN1P10915 354 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-207ENST00000554927 ENGP17813 658 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 ABCD1P33897 745 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 MAPK7Q13164 816 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM150AQ86TG1 271 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 MON1AQ86VX9 555 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 CHCHD4Q8N4Q1 142 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 CCDC33Q8N5R6 958 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 SPPL2BQ8TCT7 592 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 C2orf15Q8WU43 125 aaKnown RBP14.27□□□□□ -0.13
TUBB3-207ENST00000554927 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 SPACA7Q96KW9 195 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 CNOT6LQ96LI5 555 aaKnown RBP14.27□□□□□ -0.13
TUBB3-207ENST00000554927 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 GTPBP2Q9BX10 602 aaKnown RBP14.27□□□□□ -0.13
TUBB3-207ENST00000554927 RPF1Q9H9Y2 349 aaKnown RBP14.27□□□□□ -0.13
TUBB3-207ENST00000554927 DSEQ9UL01 958 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.13
TUBB3-207ENST00000554927 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 H0Y626 953 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 FAM13AO94988 1023 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 TRIM16O95361 564 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 MAPTP10636 758 aaKnown RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 PAX3P23760 479 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 SLC12A3P55017 1021 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 ZNF268Q14587 947 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 KYAT1Q16773 422 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM119Q4V9L6 283 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 PDZD3Q86UT5 571 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 SYT12Q8IV01 421 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 MYCT1Q8N699 235 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM161BQ8NDZ6 487 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 MDGA1Q8NFP4 955 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 USP33Q8TEY7 942 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 RLN3Q8WXF3 142 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 PYM1Q9BRP8 204 aaKnown RBP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 HAPLN2Q9GZV7 340 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
TUBB3-207ENST00000554927 DMXL2Q8TDJ6 3036 aa14.26□□□□□ -0.13
TUBB3-207ENST00000554927 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CYB561D2O14569 222 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 TNFRSF10BO14763 440 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 TBCAO75347 108 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CYP11A1P05108 521 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CKMP06732 381 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CSH1P0DML2 217 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CSH2P0DML3 217 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 HMGA1P17096 107 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 GPR15P49685 360 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 LIG4P49917 911 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 SMARCB1Q12824 385 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 ENOX2Q16206 610 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 SOWAHCQ53LP3 525 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 SDHAF4Q5VUM1 108 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 SPATA1Q5VX52 437 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 C9orf57Q5W0N0 161 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 LYSMD4Q5XG99 296 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 LMBRD2Q68DH5 695 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 JADE1Q6IE81 842 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 LRRTM3Q86VH5 581 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 PROSER1Q86XN7 944 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 DCP1BQ8IZD4 617 aaKnown RBP14.25□□□□□ -0.13
TUBB3-207ENST00000554927 ABCA7Q8IZY2 2146 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 PI4K2AQ9BTU6 479 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
TUBB3-207ENST00000554927 USP17L7P0C7H9 530 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 TXLNAP40222 546 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 PTGER3P43115 390 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 SEMA3BQ13214 749 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 CUL4AQ13619 759 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 ZNF77Q15935 545 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 COL28A1Q2UY09 1125 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 EML3Q32P44 896 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 PIP4P1Q86T03 277 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 EFCAB13Q8IY85 973 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 KRI1Q8N9T8 703 aaKnown RBP14.24□□□□□ -0.13
TUBB3-207ENST00000554927 WHAMMQ8TF30 809 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms