RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CNTLNQ9NXG0 1405 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 A0A1B0GTW7 788 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 A0A1W2PPL8 197 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZAR1LA6NP61 321 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 INO80B-WBP1J3KQ70 363 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PHGDHO43175 533 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MGEA5O60502 916 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PQBP1O60828 265 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SLC43A1O75387 559 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CDKL5O76039 1030 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 GNAI3P08754 354 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SBK3P0C264 359 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ITGAMP11215 1152 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ALAS1P13196 640 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MGAT1P26572 445 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PIK3CGP48736 1102 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 GNAI1P63096 354 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 HSD11B2P80365 405 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SEMA5AQ13591 1074 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 KHDC1LQ5JSQ8 128 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SYCP2LQ5T4T6 812 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 IL31Q6EBC2 164 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SWSAP1Q6NVH7 229 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 C11orf96Q7Z7L8 435 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PPP1R3BQ86XI6 285 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 COL23A1Q86Y22 540 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 FAM90A1Q86YD7 464 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NLGN4YQ8NFZ3 816 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 LRTOMTQ8WZ04 291 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NELL1Q92832 810 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF764Q96H86 408 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 Q96MF0 132 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 C1orf43Q9BWL3 253 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PACSIN1Q9BY11 444 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 C22orf23Q9BZE7 217 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 INO80BQ9C086 356 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF700Q9H0M5 742 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NUP62CLQ9H1M0 184 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MRPL46Q9H2W6 279 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZMAT3Q9HA38 289 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ATP6V0A4Q9HBG4 840 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CNNM1Q9NRU3 951 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 FAM30AQ9NZY2 134 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PTGFRNQ9P2B2 879 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CPA4Q9UI42 421 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 TPCN1Q9ULQ1 816 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PCDHA6Q9UN73 950 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ATP11BQ9Y2G3 1177 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PCDHGB6Q9Y5F9 930 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MYO5BQ9ULV0 1848 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MAP3K1Q13233 1512 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 TNRQ92752 1358 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 UBR1Q8IWV7 1749 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 TIAM1Q13009 1591 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PMM2O15305 246 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 FRS3O43559 492 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 AHSGP02765 367 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 KITP10721 976 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MYF5P13349 255 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 FGFR4P22455 802 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PEX2P28328 305 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SLC6A4P31645 630 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NEK3P51956 506 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 RHBDL3P58872 404 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NOMO3P69849 1222 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 POLD3Q15054 466 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CCDC93Q567U6 631 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 NOMO2Q5JPE7 1267 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF772Q68DY9 489 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 APOA5Q6Q788 366 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 AOPEPQ8N6M6 819 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 FAM98AQ8NCA5 519 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SIMC1Q8NDZ2 872 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SVIPQ8NHG7 77 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 IL31RAQ8NI17 732 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 TNPO1Q92973 898 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CAVIN3Q969G5 261 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 MARS2Q96GW9 593 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 APOL5Q9BWW9 433 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ALOXE3Q9BYJ1 711 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 LRRC27Q9C0I9 530 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 GSTO2Q9H4Y5 243 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 BRD9Q9H8M2 597 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 RSAD1Q9HA92 442 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SLAMF7Q9NQ25 335 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 CHST12Q9NRB3 414 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 PIH1D1Q9NWS0 290 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 JKAMPQ9P055 326 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 HSFX1Q9UBD0 423 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 ZDHHC8Q9ULC8 765 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 BRWD3Q6RI45 1802 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 A2MP01023 1474 aa1.88□□□□□ -2.11
PRPF39-208ENST00000554785 SPAG9O60271 1321 aaKnown RBP1.88□□□□□ -2.11
PRPF39-208ENST00000554785 JCADQ9P266 1359 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PLXNC1O60486 1568 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 REREQ9P2R6 1566 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 INO80Q9ULG1 1556 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SHPRHQ149N8 1683 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PRSS29PA6NIE9 313 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PEX14O75381 377 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms