RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 GPD1LQ8N335 351 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SYT2Q8N9I0 419 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SCAMP5Q8TAC9 235 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF461Q8TAF7 563 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LEO1Q8WVC0 666 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FAM3CQ92520 227 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TSC1Q92574 1164 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 KLK6Q92876 244 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM44Q96DX7 344 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DDX27Q96GQ7 796 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF560Q96MR9 790 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LRRC27Q9C0I9 530 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SCAND2PQ9GZW5 306 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LINC00597Q9H2U6 94 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FAM207AQ9NSI2 230 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SSX2IPQ9Y2D8 614 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DOCK2Q92608 1830 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DIDO1Q9BTC0 2240 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 PCNX2A6NKB5 2137 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CYP3A7-CYP3A51PA0A087WV96 503 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SLC12A8A0AV02 714 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM110-MUSTN1A8MSY1 372 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 A8MX80 341 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CHURC1-FNTBB4DL54 471 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 WASH3PC4AMC7 463 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF197O14709 1029 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM24O15164 1050 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 THAP12O43422 761 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 STX10O60499 249 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SYNCRIPO60506 623 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZRANB2O95218 330 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CST3P01034 146 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RPN1P04843 607 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PNMA6AP0CW24 399 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ACADMP11310 421 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PCSK1P29120 753 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FNTBP49356 437 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TUFMP49411 452 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NT5C2P49902 561 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MXI1P50539 228 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZP2Q05996 745 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ITIH3Q06033 890 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SLC39A14Q15043 492 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NPY5RQ15761 445 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SV2CQ496J9 727 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TDRD10Q5VZ19 366 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NAIF1Q69YI7 327 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 OR6B2Q6IFH4 312 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CNNM4Q6P4Q7 775 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 Q6ZS52 159 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TRAPPC11Q7Z392 1133 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NOP9Q86U38 636 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 EFCAB13Q8IY85 973 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ADSSL1Q8N142 457 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SLC44A3Q8N4M1 653 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FAM160A2Q8N612 972 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 EFHBQ8N7U6 833 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 LINC00301Q8NCQ3 95 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM161BQ8NDZ6 487 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SLC2A14Q8TDB8 520 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SNRNP27Q8WVK2 155 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PMM1Q92871 262 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 IRF7Q92985 503 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZSWIM3Q96MP5 696 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CLSTN3Q9BQT9 956 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 POLR3CQ9BUI4 534 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 BBS2Q9BXC9 721 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NIFKQ9BYG3 293 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CWH43Q9H720 699 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ACP6Q9NPH0 428 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PLCB1Q9NQ66 1216 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGEF4Q9NR80 690 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 AASDHPPTQ9NRN7 309 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 KRT82Q9NSB4 513 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DUS2Q9NX74 493 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CLEC1BQ9P126 229 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CFAP97Q9P2B7 532 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARMCX3Q9UH62 379 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FEZ2Q9UHY8 353 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RALYQ9UKM9 306 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MRPS17Q9Y2R5 130 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MTF2Q9Y483 593 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 GPSM3Q9Y4H4 160 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 YIPF1Q9Y548 306 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHB9Q9Y5E1 797 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHA5Q9Y5H7 936 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RAD54BQ9Y620 910 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MYH9P35579 1960 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PCNX1Q96RV3 2341 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NAV1Q8NEY1 1877 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC168Q8NDH2 2452 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SPTBN5Q9NRC6 3674 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 OTOFQ9HC10 1997 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TYW5A2RUC4 315 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ANTXRLA6NF34 631 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PI4K2BG5E9Z4 385 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DAPK3O43293 454 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CALUO43852 315 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms