RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
ABCD4-220ENST00000553998 ARHGAP28Q9P2N2 729 aa8.35□□□□□ -1.07
ABCD4-220ENST00000553998 TBX20Q9UMR3 447 aa8.35□□□□□ -1.07
ABCD4-220ENST00000553998 NEUROG3Q9Y4Z2 214 aa8.35□□□□□ -1.07
ABCD4-220ENST00000553998 ITPR1Q14643 2758 aa8.35□□□□□ -1.07
ABCD4-220ENST00000553998 AKAP13Q12802 2813 aa8.35□□□□□ -1.07
ABCD4-220ENST00000553998 ANK1P16157 1881 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 MTMR11A4FU01 709 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 RNF40O75150 1001 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 SMC2O95347 1197 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 MBD3O95983 291 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 TOP3BO95985 862 aaKnown RBP8.34□□□□□ -1.07
ABCD4-220ENST00000553998 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 SPINK2P20155 84 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 PTMSP20962 102 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 PAX3P23760 479 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 GABRR2P28476 465 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 AFMP43652 599 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 GALK1P51570 392 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 NCKAP1LP55160 1127 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 OSTNP61366 133 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 AMPD2Q01433 879 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 EHHADHQ08426 723 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 DPYDQ12882 1025 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 POSTNQ15063 836 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 ZNF568Q3ZCX4 644 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 PMS2CLQ68D20 193 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 MPZL3Q6UWV2 235 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 STXBP4Q6ZWJ1 553 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 GPIHBP1Q8IV16 184 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 ATAD1Q8NBU5 361 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 TMEM161BQ8NDZ6 487 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
ABCD4-220ENST00000553998 HVCN1Q96D96 273 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 FIZ1Q96SL8 496 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 TARS2Q9BW92 718 aaKnown RBP8.34□□□□□ -1.07
ABCD4-220ENST00000553998 GTPBP4Q9BZE4 634 aaKnown RBP8.34□□□□□ -1.07
ABCD4-220ENST00000553998 BLZF1Q9H2G9 400 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 ZHX3Q9H4I2 956 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 POLD4Q9HCU8 107 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 TMEM9BQ9NQ34 198 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
ABCD4-220ENST00000553998 GREB1Q4ZG55 1949 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TICRRQ7Z2Z1 1910 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TTC26A0AVF1 554 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 UPK3BL1B0FP48 263 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 UPK3BL2E5RIL1 263 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 KHNYNO15037 678 aaKnown RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 DCLK1O15075 740 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 SLC16A4O15374 487 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TOM1L1O75674 476 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 APBB3O95704 486 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 EGFP01133 1207 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 ADRB2P07550 413 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 DDX6P26196 483 aaKnown RBP eCLIP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 CDC25CP30307 473 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TUFMP49411 452 aaKnown RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 GTF2BQ00403 316 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 CREB5Q02930 508 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 STRN3Q13033 797 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 PSMD2Q13200 908 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 CUL4BQ13620 913 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 KCNB1Q14721 858 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 RASSF3Q86WH2 238 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 SFR1Q86XK3 245 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 GRAMD1CQ8IYS0 662 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 CMTM8Q8IZV2 173 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 EZH1Q92800 747 aaPredicted RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 PGLYRP2Q96PD5 576 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 GSDMAQ96QA5 445 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TSPAN18Q96SJ8 248 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 MRPL44Q9H9J2 332 aaKnown RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 EXOC1Q9NV70 894 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 POLR3BQ9NW08 1133 aaPredicted RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 RMND1Q9NWS8 449 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TUBGCP4Q9UGJ1 667 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 EVLQ9UI08 416 aaPredicted RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 LHX6Q9UPM6 363 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
ABCD4-220ENST00000553998 TIMM13Q9Y5L4 95 aaPredicted RBP8.33□□□□□ -1.08
ABCD4-220ENST00000553998 K7ENM7 598 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 EIF3DO15371 548 aaKnown RBP eCLIP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 KLRC4O43908 158 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 PPP1R37O75864 691 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 RHOBTB3O94955 611 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 PIGRP01833 764 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 F11P03951 625 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 RPN1P04843 607 aaKnown RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 CYP11A1P05108 521 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 GJA4P35212 333 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 IRX4P78413 519 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 MCL1Q07820 350 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 DMC1Q14565 340 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms