RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TUFMP49411 452 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 EPHB3P54753 998 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ENPEPQ07075 957 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CETN1Q12798 172 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 GPR17Q13304 367 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 VEPH1Q14D04 833 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 NFE2Q16621 373 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF699Q32M78 642 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 WDR72Q3MJ13 1102 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF667Q5HYK9 610 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CYP4A22Q5TCH4 519 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 TCERG1LQ5VWI1 586 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 WSCD1Q658N2 575 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 TCEAL8Q8IYN2 117 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ADGRF2Q8IZF7 708 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ADSSL1Q8N142 457 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 LEMD2Q8NC56 503 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 SPATA20Q8TB22 786 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 SPPL2BQ8TCT7 592 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 PARD3BQ8TEW8 1205 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 NECAB3Q96P71 396 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 PGLYRP2Q96PD5 576 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CDK15Q96Q40 435 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 POMKQ9H5K3 350 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 MMRN2Q9H8L6 949 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 WDR6Q9NNW5 1121 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 GDAP2Q9NXN4 497 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 DDX43Q9NXZ2 648 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CLUHO75153 1309 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 TCHHQ07283 1943 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ADAM12O43184 909 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 TBC1D4O60343 1298 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 AKAP3O75969 853 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 GNA14O95837 355 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 MBD3O95983 291 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 POU2F2P09086 479 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 PTPN2P17706 415 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 SP100P23497 879 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 FSHRP23945 695 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 MAPK1P28482 360 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 GTF2H1P32780 548 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 RPIAP49247 311 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 CASP4P49662 377 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 GDF10P55107 478 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 DHX9Q08211 1270 aaKnown RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 PAK1Q13153 545 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 SGSM1Q2NKQ1 1148 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 MGAT5BQ3V5L5 792 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 SLC39A12Q504Y0 691 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 CENPPQ6IPU0 288 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 RSPO2Q6UXX9 243 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 C4orf50Q6ZRC1 276 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 CLEC17AQ6ZS10 378 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 GRASPQ7Z6J2 395 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ITIH5Q86UX2 942 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 PDCL2Q8N4E4 241 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 OR6B3Q8NGW1 331 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 NELFBQ8WX92 580 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 TAF4BQ92750 862 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 GCNAQ96QF7 691 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 SEPT5Q99719 369 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ACBD6Q9BR61 282 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 KIAA1522Q9P206 1035 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ARMCX3Q9UH62 379 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 SIX4Q9UIU6 781 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 DCTN4Q9UJW0 460 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 L1RE1Q9UN81 338 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ASB3Q9Y575 518 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 PCDHB5Q9Y5E4 795 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 INSL5Q9Y5Q6 135 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 ZFP37Q9Y6Q3 630 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-209ENST00000553855 MYO7AQ13402 2215 aa8.92□□□□□ -0.98
PSEN1-209ENST00000553855 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ATP8B3O60423 1300 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 PTPRJQ12913 1337 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 A8MXQ7 604 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 LOC730098B7Z3J9 87 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 FGF19O95750 216 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 OR4Q2P0C623 313 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 CCDC192P0DO97 292 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 GNL1P36915 607 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms