RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 ODF2LQ9ULJ1 636 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 L1RE1Q9UN81 338 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 PCDHB5Q9Y5E4 795 aa12.12□□□□□ -0.47
APEX1-206ENST00000553681 C4orf47A7E2U8 309 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 H0YCG3 227 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 TRDMT1O14717 391 aaKnown RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 TM4SF5O14894 197 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 KCNK5O95279 499 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 FGF19O95750 216 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 KRT19P08727 400 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 ADSSP30520 456 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 DDIT3P35638 169 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 CASP5P51878 434 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 ZNF131P52739 623 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 PSMC1P62191 440 aaKnown RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 FOXC1Q12948 553 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 DMC1Q14565 340 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 MTF1Q14872 753 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 KIAA1211LQ6NV74 962 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 ARMCX6Q7L4S7 300 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 SPPL2BQ8TCT7 592 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 EDEM2Q9BV94 578 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 OXCT2Q9BYC2 517 aaPredicted RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 PCIF1Q9H4Z3 704 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
APEX1-206ENST00000553681 DUS2Q9NX74 493 aaKnown RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
APEX1-206ENST00000553681 FRYQ5TBA9 3013 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 CKMP06732 381 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 IFNAR2P48551 515 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 GTF2BQ00403 316 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 BECN1Q14457 450 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 KYAT1Q16773 422 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 UAP1L1Q3KQV9 507 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 SV2CQ496J9 727 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 FRMD1Q8N878 549 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 C1orf127Q8N9H9 656 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 SH3RF2Q8TEC5 729 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 LARP4BQ92615 738 aaKnown RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 DSEQ9UL01 958 aa12.1□□□□□ -0.47
APEX1-206ENST00000553681 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
APEX1-206ENST00000553681 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 ADAMTS9Q9P2N4 1935 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 ASCC3Q8N3C0 2202 aaKnown RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CAVIN2O95810 425 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 HNRNPLP14866 589 aaKnown RBP eCLIP12.09□□□□□ -0.47
APEX1-206ENST00000553681 HOXA6P31267 233 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 USP46P62068 366 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 ZXDBP98169 803 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 TSPY1Q01534 308 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 IFRD2Q12894 506 aaPredicted RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 SF3A1Q15459 793 aaKnown RBP12.09□□□□□ -0.47
APEX1-206ENST00000553681 ZNF77Q15935 545 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CD302Q8IX05 232 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 SYNPOQ8N3V7 929 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 DEFB119Q8N690 84 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CD101Q93033 1021 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 HPS3Q969F9 1004 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 ELMO3Q96BJ8 720 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 PANK2Q9BZ23 570 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 ASB7Q9H672 318 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 CLIC4Q9Y696 253 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 PTPRDP23468 1912 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
APEX1-206ENST00000553681 MYO18AQ92614 2054 aaKnown RBP12.08□□□□□ -0.48
APEX1-206ENST00000553681 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
APEX1-206ENST00000553681 MYMKA6NI61 221 aa12.08□□□□□ -0.48
APEX1-206ENST00000553681 GCNT3O95395 438 aa12.08□□□□□ -0.48
APEX1-206ENST00000553681 ABL1P00519 1130 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms