RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ASCC1Q8N9N2 400 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ADA2Q9NZK5 511 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TTLL3Q9Y4R7 772 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TFECO14948 347 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 UQCRBP14927 111 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.915e-6■■■■■ 46.6
GTF2A1-203ENST00000553612 GNA11P29992 359 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ECT2LQ008S8 904 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 BNIP3Q12983 259 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CYP2A13Q16696 494 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 DALRD3Q5D0E6 543 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 RMND5BQ96G75 393 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ART5Q96L15 291 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 EFHD1Q9BUP0 239 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 HMG20AQ9NP66 347 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 LRRC53A6NM62 1247 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 SCAMP1O15126 338 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 NCAM2O15394 837 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 NDUFS2O75306 463 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 EXOC3L4Q17RC7 722 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CSRNP1Q96S65 589 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CLK4Q9HAZ1 481 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CHORDC1Q9UHD1 332 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 SH3PXD2BA1X283 911 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PITPNM1O00562 1244 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 KRT1P04264 644 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ACADVLP49748 655 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 DAPK1P53355 1430 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TNFAIP2Q03169 654 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TTBK2Q6IQ55 1244 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PLEKHO2Q8TD55 490 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 SGCDQ92629 289 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ESR2Q92731 530 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 MAP3K14Q99558 947 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 SAYSD1Q9NPB0 183 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PTBP2Q9UKA9 531 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 BCS1LQ9Y276 419 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TOR1BO14657 336 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SCO1O75880 301 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 PRCPP42785 496 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 BARGINQ6ZT62 677 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SERPINB12Q96P63 405 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 C6orf62Q9GZU0 229 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 STK17AQ9UEE5 414 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 AURKCQ9UQB9 309 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 FAM135AQ9P2D6 1515 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 MTA2O94776 668 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 AQP4P55087 323 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC39A14Q15043 492 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF574Q6ZN55 896 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 CADM2Q8N3J6 435 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 C3orf58Q8NDZ4 430 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 PRMT3O60678 531 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 C6orf222P0C671 652 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 POU6F2P78424 691 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SNX8Q9Y5X2 465 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 A0A1W2PQ27 194 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 A0A1W2PQ64 194 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 A0A1W2PQD8 194 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 FOXO6A8MYZ6 492 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 PLEKHA8P1O95397 391 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 GYPCP04921 128 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 APLP1P51693 650 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 KPNA2P52292 529 aaKnown RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 CAPZA1P52907 286 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 C16orf86Q6ZW13 317 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SV2BQ7L1I2 683 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SYTL5Q8TDW5 730 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SEMA6AQ9H2E6 1030 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 USP20Q9Y2K6 914 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF521Q96K83 1311 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 VCLP18206 1134 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 TRIM23P36406 574 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 RCAN1P53805 252 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 GPR85P60893 370 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 PCDH1Q08174 1060 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 OTOP3Q7RTS5 596 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 LRMDAQ9H2I8 198 aa9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF608Q9ULD9 1512 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-203ENST00000553612 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms