RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 DICER1Q9UPY3 1922 aaKnown RBP6.21□□□□□ -1.42
ATXN3-218ENST00000553309 PIPSLA2A3N6 862 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 GRID2IPA4D2P6 1211 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 SGTAO43765 313 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 CDKL5O76039 1030 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 RHOBTB3O94955 611 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 GPANK1O95872 356 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-218ENST00000553309 FGFR4P22455 802 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 HSD11B2P80365 405 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 OCA2Q04671 838 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 UAP1L1Q3KQV9 507 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 PPP4R3AQ6IN85 833 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 PCSK4Q6UW60 755 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 CTU1Q7Z7A3 348 aaKnown RBP6.2□□□□□ -1.42
ATXN3-218ENST00000553309 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 DCBLD1Q8N8Z6 715 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 SUPT20HQ8NEM7 779 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 IFI44Q8TCB0 444 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 KAT5Q92993 513 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-218ENST00000553309 CLPTM1LQ96KA5 538 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 PCDHB1Q9Y5F3 818 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 DLEC1Q9Y238 1755 aa6.2□□□□□ -1.42
ATXN3-218ENST00000553309 USP42Q9H9J4 1324 aaKnown RBP6.2□□□□□ -1.42
ATXN3-218ENST00000553309 SZT2Q5T011 3432 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 CDHR4A6H8M9 788 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 GRM6O15303 877 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 SBK3P0C264 359 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 MTHFD1P11586 935 aaKnown RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 PROZP22891 400 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 ADKP55263 362 aaKnown RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 ZNF280AP59817 542 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 NOMO3P69849 1222 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 BEND2Q8NDZ0 799 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 RNF31Q96EP0 1072 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 DMRTA2Q96SC8 542 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 TOR3AQ9H497 397 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 TMOD3Q9NYL9 352 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 MTO1Q9Y2Z2 717 aaKnown RBP6.19□□□□□ -1.42
ATXN3-218ENST00000553309 CD163L1Q9NR16 1453 aa6.19□□□□□ -1.42
ATXN3-218ENST00000553309 KDRP35968 1356 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 FER1L6Q2WGJ9 1857 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 H0YIN7 160 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 CELF2O95319 508 aaKnown RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 RPLP2P05387 115 aaKnown RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 HOXC9P31274 260 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 SLC6A4P31645 630 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 CXADRP78310 365 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 RAB39AQ14964 217 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 PABPC1LQ4VXU2 614 aaKnown RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 Q6YL49 198 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 MIER2Q8N344 545 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 IL17RDQ8NFM7 739 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 GPATCH3Q96I76 525 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 PNKPQ96T60 521 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 SYBUQ9NX95 663 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 NOP58Q9Y2X3 529 aaKnown RBP6.18□□□□□ -1.42
ATXN3-218ENST00000553309 MAP3K19Q56UN5 1328 aa6.18□□□□□ -1.42
ATXN3-218ENST00000553309 SCN11AQ9UI33 1791 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
ATXN3-218ENST00000553309 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
ATXN3-218ENST00000553309 HKR1P10072 659 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 ITGAMP11215 1152 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 TM4SF1P30408 202 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-218ENST00000553309 AVPR1BP47901 424 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 AMPHP49418 695 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 INHBEP58166 350 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 UTP14CQ5TAP6 766 aaKnown RBP6.17□□□□□ -1.42
ATXN3-218ENST00000553309 GPR149Q86SP6 731 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 TTC7BQ86TV6 843 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 NACC2Q96BF6 587 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 TMEM74BQ9NUR3 256 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
ATXN3-218ENST00000553309 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms