RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SV2BQ7L1I2 683 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 DYMQ7RTS9 669 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 SPATA2LQ8IUW3 424 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-217ENST00000552801 CMTM8Q8IZV2 173 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 TMEM130Q8N3G9 435 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 CPA6Q8N4T0 437 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 TTC9BQ8N6N2 239 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 ACCSQ96QU6 501 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 LRRC3Q9BY71 257 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 SMG9Q9H0W8 520 aaKnown RBP9.36□□□□□ -0.91
TMEM116-217ENST00000552801 GKN1Q9NS71 199 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 SEL1LQ9UBV2 794 aa9.36□□□□□ -0.91
TMEM116-217ENST00000552801 F5P12259 2224 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 TRAV19A0A0A6YYK7 116 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 ARNTLO00327 626 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 SLC30A4O14863 429 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 AXIN1O15169 862 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PAPSS2O95340 614 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 VNN2O95498 520 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PRAMEF12O95522 483 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 CKMP06732 381 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 HAPLN1P10915 354 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PCSK1P29120 753 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 WEE1P30291 646 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PDE6CP51160 858 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 MYO1EQ12965 1108 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 SRSF5Q13243 272 aaKnown RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PDGFRLQ15198 375 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 SF3A1Q15459 793 aaKnown RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 CACNA2D4Q7Z3S7 1137 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 WDR5BQ86VZ2 330 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 SFR1Q86XK3 245 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 SCN4BQ8IWT1 228 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 RSPRY1Q96DX4 576 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 FAM213AQ9BRX8 229 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PI4K2AQ9BTU6 479 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 EBF3Q9H4W6 596 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 PARD6AQ9NPB6 346 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 TDP1Q9NUW8 608 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 DDX43Q9NXZ2 648 aaKnown RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-217ENST00000552801 TBC1D7Q9P0N9 293 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 STK17AQ9UEE5 414 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 AGAP1Q9UPQ3 857 aa9.35□□□□□ -0.91
TMEM116-217ENST00000552801 COL4A2P08572 1712 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TSC2P49815 1807 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 SCN1AP35498 2009 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ANO9A1A5B4 782 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ANKRD63C9JTQ0 380 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TRIM66O15016 1216 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TNNC2P02585 160 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ITGB3P05106 788 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ADRB2P07550 413 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 USP17L7P0C7H9 530 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TDGF1P13385 188 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ATF6P18850 670 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 DRD1P21728 446 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ANXA13P27216 316 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 POLR2BP30876 1174 aaKnown RBP9.34□□□□□ -0.91
TMEM116-217ENST00000552801 STAT6P42226 847 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 NLRP12P59046 1061 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 DMWDQ09019 674 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ALCAMQ13740 583 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 KCNB1Q14721 858 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ELF2Q15723 593 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 C4orf50Q6ZRC1 276 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 CCDC73Q6ZRK6 1079 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 TMEM86AQ8N2M4 240 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 CSGALNACT2Q8N6G5 542 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 GAB3Q8WWW8 586 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 KCNN1Q92952 543 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ATP2A3Q93084 1043 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ACDQ96AP0 544 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 P2RY13Q9BPV8 354 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 SLC46A2Q9BY10 475 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 CCSER1Q9C0I3 900 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 ST6GALNAC4Q9H4F1 302 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 BLOC1S4Q9NUP1 217 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 DUS2Q9NX74 493 aaKnown RBP9.34□□□□□ -0.91
TMEM116-217ENST00000552801 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
TMEM116-217ENST00000552801 NCANO14594 1321 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 ZNF292O60281 2723 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 SHISA7A6NL88 538 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 K7ESF4 209 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 FAM189A1O60320 539 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 RHOBTB1O94844 696 aa9.33□□□□□ -0.92
TMEM116-217ENST00000552801 HOXA6P31267 233 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms