RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FOXN3O00409 490 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 LYPLA2O95372 231 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 GH2P01242 217 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 FTLP02792 175 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 GHRP10912 638 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 GLB1P16278 677 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 RAB6AP20340 208 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CTNNA2P26232 953 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 HOXA13P31271 388 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 HNRNPH1P31943 449 aaKnown RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 VAMP7P51809 220 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 PMS2P54278 862 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 SNAP25P60880 206 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 IFFO1Q0D2I5 559 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 SLMAPQ14BN4 828 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 GRIK4Q16099 956 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 KRT71Q3SY84 523 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CBWD6Q4V339 395 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ZC2HC1CQ53FD0 456 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 LACTB2Q53H82 288 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CBWD3Q5JTY5 395 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CBWD5Q5RIA9 395 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 STYK1Q6J9G0 422 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 SHISA2Q6UWI4 295 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CCDC121Q6ZUS5 278 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ARMCX6Q7L4S7 300 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 RPAINQ86UA6 219 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 SUPT20HQ8NEM7 779 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 OLIG1Q8TAK6 271 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 LMO3Q8TAP4 145 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CYP2W1Q8TAV3 490 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 BAHD1Q8TBE0 780 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 PIGOQ8TEQ8 1089 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ATP8B4Q8TF62 1192 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 MAIP1Q8WWC4 291 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 HVCN1Q96D96 273 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CYFIP2Q96F07 1278 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CABS1Q96KC9 395 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 PSMD1Q99460 953 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 MXRA8Q9BRK3 442 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF577Q9BSK1 485 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ROPN1BQ9BZX4 212 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 NEUROG2Q9H2A3 272 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CENPHQ9H3R5 247 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 VCPKMTQ9H867 229 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ROPN1Q9HAT0 212 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 UBE2TQ9NPD8 197 aaPredicted RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ZDHHC18Q9NUE0 388 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 MAP3K20Q9NYL2 800 aaKnown RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 TMOD2Q9NZR1 351 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 LARSQ9P2J5 1176 aaKnown RBP6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 FEM1BQ9UK73 627 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 PNMA2Q9UL42 364 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 MTUS1Q9ULD2 1270 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ALG6Q9Y672 507 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 CAPN7Q9Y6W3 813 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ZMYM2Q9UBW7 1377 aa6.4□□□□□ -1.39
CHMP4A-210ENST00000552620 A0A1W2PRG0 241 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 KIAA0391O15091 583 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ASAP2O43150 1006 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ECE2O60344 883 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 HIP1RO75146 1068 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 UBOX5O94941 541 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 CFBP00751 764 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 AGTP01019 485 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ALAS1P13196 640 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 RARGP13631 454 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PLS3P13797 630 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 VCAM1P19320 739 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ABCB4P21439 1286 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 HPDP32754 393 aaPredicted RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 GTF2H1P32780 548 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 FLT3P36888 993 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PREPP48147 710 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PEX5P50542 639 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 CYP2J2P51589 502 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SEC24CP53992 1094 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 MFAP3P55082 362 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 MAGOHP61326 146 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 RNF4P78317 190 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 GTF2BQ00403 316 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ADCY2Q08462 1091 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 IFT88Q13099 833 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 MAPK7Q13164 816 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PRPF4BQ13523 1007 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC10A6Q3KNW5 377 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 EPC2Q52LR7 807 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ZC3H12BQ5HYM0 836 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ERMARDQ5T6L9 678 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SEL1L2Q5TEA6 688 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 GKAP1Q5VSY0 366 aaPredicted RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 DENND2CQ68D51 928 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SYDE1Q6ZW31 735 aaPredicted RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 JAMLQ86YT9 394 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 TMEM192Q8IY95 271 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms