RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 PRPF4O43172 522 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNB3-219ENST00000551544 ASPAP45381 313 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 EFNA5P52803 228 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 GPX6P59796 221 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 LAMTOR4Q0VGL1 99 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 TFDP1Q14186 410 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 MAPK6Q16659 721 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 VSIG1Q86XK7 387 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 CEP120Q8N960 986 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 FBF1Q8TES7 1133 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 ERP27Q96DN0 273 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 MAK16Q9BXY0 300 aaKnown RBP13.7□□□□□ -0.22
CACNB3-219ENST00000551544 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 ETNK1Q9HBU6 452 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 PSMC3IPQ9P2W1 217 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-219ENST00000551544 CYTH4Q9UIA0 394 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 LRCH4O75427 683 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 GJB1P08034 283 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CD48P09326 243 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 KRT4P19013 534 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CDH8P55286 799 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 ACVR2BQ13705 512 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 FNBP1LQ5T0N5 605 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 KIAA0319LQ8IZA0 1049 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 ARFGAP1Q8N6T3 406 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 RSAD2Q8WXG1 361 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CPSF3Q9UKF6 684 aaKnown RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 C15orf41Q9Y2V0 281 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CLUHO75153 1309 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 HOXC6P09630 235 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 PTPN7P35236 360 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 MSH2P43246 934 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 MYO1EQ12965 1108 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 ASRGL1Q7L266 308 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CHST13Q8NET6 341 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 CPT1BQ92523 772 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 TRIM6Q9C030 488 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-219ENST00000551544 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 SENP1Q9P0U3 644 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 PCDHGC3Q9UN70 934 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
CACNB3-219ENST00000551544 WDR91A4D1P6 747 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TNNC2P02585 160 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 POLR2BP30876 1174 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 GEMIN4P57678 1058 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 FAM182AQ5T1J6 154 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 LVRNQ6Q4G3 990 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 C3orf62Q6ZUJ4 267 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 NCAPG2Q86XI2 1143 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 PPIL6Q8IXY8 311 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 NLRP4Q96MN2 994 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 METTL5Q9NRN9 209 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 SIGLEC16A6NMB1 481 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 GOLGA8RI6L899 631 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 MAGEB2O15479 319 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 B4GALT5O43286 388 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 UNC5CO95185 931 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 KRT7P08729 469 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 KDELR1P24390 212 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 ARL4CP56559 192 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 GRM1Q13255 1194 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TAF5Q15542 800 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 PDK4Q16654 411 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 BBS9Q3SYG4 887 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TREML2Q5T2D2 321 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 IER5Q5VY09 327 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 RFX6Q8HWS3 928 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 NSMCE1Q8WV22 266 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 HSPH1Q92598 858 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms