RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CHN2P52757 468 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 DSG1Q02413 1049 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PPARDQ03181 441 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ASPHQ12797 758 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 STRN3Q13033 797 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 MAPK7Q13164 816 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SNAPC2Q13487 334 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TCIRG1Q13488 830 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SUZ12Q15022 739 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PPP2R5BQ15173 497 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 DLGAP5Q15398 846 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CLUL1Q15846 466 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CCDC6Q16204 474 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PROSER3Q2NL68 480 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CWF19L2Q2TBE0 894 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 MYLK3Q32MK0 819 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CCDC14Q49A88 953 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC9C1Q4G0N8 1177 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD20A4Q4UJ75 823 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 OLFML2BQ68BL8 750 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF280DQ6N043 979 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM117BQ6P1L5 589 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 LRRC8BQ6P9F7 803 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 IGF2-ASQ6U949 168 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 IZUMO2Q6UXV1 221 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 RBM44Q6ZP01 1051 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 INTS8Q75QN2 995 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 RRAGAQ7L523 313 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CYFIP1Q7L576 1253 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 LRP10Q7Z4F1 713 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF410Q86VK4 478 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD13BQ86YJ7 626 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TDRPQ86YL5 185 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 JAMLQ86YT9 394 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CPSF7Q8N684 471 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CSGALNACT2Q8N6G5 542 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 VGLL2Q8N8G2 317 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ZFP28Q8NHY6 868 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 FBXO25Q8TCJ0 367 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 LRRC15Q8TF66 581 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CHPT1Q8WUD6 406 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SCFD1Q8WVM8 642 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CTNNBL1Q8WYA6 563 aaPredicted RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SKA1Q96BD8 255 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 NMD3Q96D46 503 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CLIP3Q96DZ5 547 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CRELD1Q96HD1 420 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 NSL1Q96IY1 281 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 DNAJC1Q96KC8 554 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TGS1Q96RS0 853 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 HEPHQ9BQS7 1158 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM51Q9BSJ1 452 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC26A6Q9BXS9 759 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TDRD1Q9BXT4 1180 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 STK33Q9BYT3 514 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC2A11Q9BYW1 496 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CELF4Q9BZC1 486 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD2Q9GZV1 360 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 GANQ9H2C0 597 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 EBF3Q9H4W6 596 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CABP5Q9NP86 173 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 UBN1Q9NPG3 1134 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ARL8BQ9NVJ2 186 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 GIN1Q9NXP7 522 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TAS2R1Q9NYW7 299 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CLIC5Q9NZA1 410 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 DENND2AQ9ULE3 1009 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 UTP11Q9Y3A2 253 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TACC3Q9Y6A5 838 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC30A1Q9Y6M5 507 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 USP54Q70EL1 1684 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PKD1L3Q7Z443 1732 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 PHRF1Q9P1Y6 1649 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 LOC105371267A0A1B0GV96 52 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 RASA4BC9J798 803 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM47E-STBD1D6RA91 191 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF701M0R085 212 aaPredicted RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 PODXLO00592 558 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF213O14771 459 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 NDC80O14777 642 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 RASA4O43374 803 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 KCNQ3O43525 872 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 CLASP2O75122 1294 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 FKBP6O75344 327 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 FBXO24O75426 580 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 TRMUO75648 421 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 BBOX1O75936 387 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 STK10O94804 968 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 TTLL1O95922 423 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 GH1P01241 217 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 CTSBP07858 339 aa5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 PABPC1P11940 636 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 CDH2P19022 906 aaPredicted RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 POLR2EP19388 210 aaKnown RBP5.57□□□□□ -1.52
LSM3P2-201ENST00000551246 RXRAP19793 462 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms