RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CEP295NLQ96MC4 621 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 BCO2Q9BYV7 579 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 GPR88Q9GZN0 384 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 CYP3A43Q9HB55 503 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
PRPF40B-211ENST00000551063 CSH1P0DML2 217 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 CSH2P0DML3 217 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 PTPN1P18031 435 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 CYP2F1P24903 491 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 CDC25CP30307 473 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 MRE11P49959 708 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 PTPN5P54829 565 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 MARSP56192 900 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 STX17P56962 302 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 TAF12Q16514 161 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 B3GALNT2Q8NCR0 500 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 SHKBP1Q8TBC3 707 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 ASIC4Q96FT7 647 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 GCNAQ96QF7 691 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 ELOVL4Q9GZR5 314 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 SDCBP2Q9H190 292 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 ZNF334Q9HCZ1 680 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
PRPF40B-211ENST00000551063 ZNF318Q5VUA4 2279 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 PIEZO1Q92508 2521 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 PMM2O15305 246 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 ECI2O75521 394 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 NOL4O94818 638 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 FGFR1OPO95684 399 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 GABRR2P28476 465 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 GPR15P49685 360 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CDR1P51861 262 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CDH8P55286 799 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CYP27A1Q02318 531 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 INCA1Q0VD86 236 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CBWD6Q4V339 395 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CBWD3Q5JTY5 395 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 CBWD5Q5RIA9 395 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 PARM1Q6UWI2 310 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 SLC44A3Q8N4M1 653 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 RSAD2Q8WXG1 361 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 FGF14Q92915 247 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 MCRS1Q96EZ8 462 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 FAM124BQ9H5Z6 455 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 IL21Q9HBE4 155 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 ZMYM5Q9UJ78 669 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
PRPF40B-211ENST00000551063 DOCK6Q96HP0 2047 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 NRG2O14511 850 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 TRIM66O15016 1216 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 MBD3O95983 291 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SRFP11831 508 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 HMGA1P17096 107 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 BDNFP23560 247 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 TEAD2Q15562 447 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 DDR2Q16832 855 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 POTEHQ6S545 545 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SCN4BQ8IWT1 228 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 TTC39CQ8N584 583 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SEMA4DQ92854 862 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SMARCD2Q92925 531 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 TRMT2BQ96GJ1 504 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SPATA17Q96L03 361 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 MYRFLQ96LU7 910 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 ASB16Q96NS5 453 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SRRTQ9BXP5 876 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 IRF2BPLQ9H1B7 796 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 SMOC2Q9H3U7 446 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 UXTQ9UBK9 157 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
PRPF40B-211ENST00000551063 P4HA2O15460 535 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 CCDC192P0DO97 292 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 GJA1P17302 382 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 ANXA13P27216 316 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 AVPR2P30518 371 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 FMO5P49326 533 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 NDST1P52848 882 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 NUBP1P53384 320 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 IER5LQ5T953 404 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 SDHAF4Q5VUM1 108 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms